Cargando…

Adaptively capturing the heterogeneity of expression for cancer biomarker identification

BACKGROUND: Identifying cancer biomarkers from transcriptomics data is of importance to cancer research. However, transcriptomics data are often complex and heterogeneous, which complicates the identification of cancer biomarkers in practice. Currently, the heterogeneity still remains a challenge fo...

Descripción completa

Detalles Bibliográficos
Autores principales:	Xie, Xin-Ping, Xie, Yu-Feng, Liu, Yi-Tong, Wang, Hong-Qiang
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2018
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6215657/ https://www.ncbi.nlm.nih.gov/pubmed/30390627 http://dx.doi.org/10.1186/s12859-018-2437-2

Ejemplares similares

A regulation probability model-based meta-analysis of multiple transcriptomics data sets for cancer biomarker identification
por: Xie, Xin-Ping, et al.
Publicado: (2017)

Quasi-linear score for capturing heterogeneous structure in biomarkers
por: Omae, Katsuhiro, et al.
Publicado: (2017)

Capturing Heterogeneity in Gene Expression Studies by Surrogate Variable Analysis
por: Leek, Jeffrey T, et al.
Publicado: (2007)

Capturing and Understanding the Dynamics and Heterogeneity of Gene Expression in the Living Cell
por: Pascual-Ahuir, Amparo, et al.
Publicado: (2020)

DNA methylation profiles capturing breast cancer heterogeneity
por: Chen, Xiao, et al.
Publicado: (2019)

Bayesian estimation of a cancer population by capture-recapture with individual capture heterogeneity and small sample
por: Bailly, Laurent, et al.
Publicado: (2015)

Sampling to capture single-cell heterogeneity
por: Rajaram, Satwik, et al.
Publicado: (2017)

Effectively identifying regulatory hotspots while capturing expression heterogeneity in gene expression studies
por: J Joo, Jong Wha, et al.
Publicado: (2014)

Statistical measures of transcriptional diversity capture genomic heterogeneity of cancer
por: Jiang, Tingting, et al.
Publicado: (2014)

A Test of Positive Association for Detecting Heterogeneity in Capture for Capture–Recapture Data
por: Jeyam, Anita, et al.
Publicado: (2017)

YM155-Adapted Cancer Cell Lines Reveal Drug-Induced Heterogeneity and Enable the Identification of Biomarker Candidates for the Acquired Resistance Setting
por: Michaelis, Martin, et al.
Publicado: (2020)

Capture and Identification of Heterogeneous Circulating Tumor Cells Using Transparent Nanomaterials and Quantum Dots-Based Multiplexed Imaging
por: Chen, Yuan-Yuan, et al.
Publicado: (2016)

The Clinical and Biomarker Association of Programmed Death Ligand 1 and its Spatial Heterogeneous Expression in Colorectal Cancer
por: Wei, Xiao-Li, et al.
Publicado: (2018)

An organoid biobank for childhood kidney cancers that captures disease and tissue heterogeneity
por: Calandrini, Camilla, et al.
Publicado: (2020)

Patient-derived xenograft models capture genomic heterogeneity in endometrial cancer
por: Bonazzi, Vanessa F., et al.
Publicado: (2022)

Nanoroughened adhesion-based capture of circulating tumor cells with heterogeneous expression and metastatic characteristics
por: Chen, Weiqiang, et al.
Publicado: (2016)

Higher expression of circulating miR-182 as a novel biomarker for breast cancer
por: WANG, PING-YU, et al.
Publicado: (2013)

Identification of Site-Specific Stroke Biomarker Candidates by Laser Capture Microdissection and Labeled Reference Peptide
por: Lian, Tingting, et al.
Publicado: (2015)

Revisiting the Effect of Capture Heterogeneity on Survival Estimates in Capture-Mark-Recapture Studies: Does It Matter?
por: Abadi, Fitsum, et al.
Publicado: (2013)

Identification of the long non-coding RNA POU3F3 in plasma as a novel biomarker for diagnosis of esophageal squamous cell carcinoma
por: Tong, Yu-Suo, et al.
Publicado: (2015)

Identification of Novel Targets for Treatment of Dilated Cardiomyopathy Based on the Ferroptosis and Immune Heterogeneity
por: Lu, Hongyu, et al.
Publicado: (2023)

A mixture model for expression deconvolution from RNA-seq in heterogeneous tissues
por: Li, Yi, et al.
Publicado: (2013)

Incorporating capture heterogeneity in the estimation of autoregressive coefficients of animal population dynamics using capture–recapture data
por: Nicolau, Pedro G., et al.
Publicado: (2020)

CaptureProbe: a java tool for designing probes for capture Hi-C applications
por: Ma, Yun-Fei, et al.
Publicado: (2020)

Identification of potential biomarkers and drugs for papillary thyroid cancer based on gene expression profile analysis
por: Qu, Ting, et al.
Publicado: (2016)

Identification of U251 glioma stem cells and their heterogeneous stem-like phenotypes
por: ZHANG, SUOJUN, et al.
Publicado: (2013)

Capturing colorectal cancer inter‐tumor heterogeneity in patient‐derived xenograft (PDX) models
por: Prasetyanti, Pramudita R., et al.
Publicado: (2018)

Identification of gastric microbiota biomarker for gastric cancer
por: Dang, Yi-Ni, et al.
Publicado: (2020)

Multifocal Organoid Capturing of Colon Cancer Reveals Pervasive Intratumoral Heterogenous Drug Responses
por: Kim, Soon‐Chan, et al.
Publicado: (2021)

Intravital Metabolic Autofluorescence Imaging Captures Macrophage Heterogeneity Across Normal and Cancerous Tissue
por: Heaster, Tiffany M., et al.
Publicado: (2021)

Nanoscale Material Heterogeneity of Glowworm Capture Threads Revealed by AFM
por: Piorkowski, Dakota, et al.
Publicado: (2021)

Editorial: Capturing Biological Complexity and Heterogeneity Using Multidimensional MRI
por: Bouhrara, Mustapha, et al.
Publicado: (2022)

Identification of novel urine proteomic biomarkers for high stamina in high-altitude adaptation
por: Liu, Chunlei, et al.
Publicado: (2023)

Interpatient Heterogeneity in Drug Response and Protein Biomarker Expression of Recurrent Ovarian Cancer
por: Hoffmann, Oliver Ingo, et al.
Publicado: (2022)

Identification of CD161 expression as a novel prognostic biomarker in breast cancer correlated with immune infiltration
por: Weng, Miaomiao, et al.
Publicado: (2022)

Identification of Pan-Cancer Biomarkers Based on the Gene Expression Profiles of Cancer Cell Lines
por: Ding, ShiJian, et al.
Publicado: (2021)

Adapting Community Detection Algorithms for Disease Module Identification in Heterogeneous Biological Networks
por: Tripathi, Beethika, et al.
Publicado: (2019)

Identification and characterization of mammaglobin-A epitope in heterogenous breast cancers for enhancing tumor-targeting therapy
por: Liu, Zhiqiang, et al.
Publicado: (2020)

Identification of differentially methylated genes as diagnostic and prognostic biomarkers of breast cancer
por: Mao, Xiao-hong, et al.
Publicado: (2021)

Integrated Analysis and Identification of Novel Biomarkers in Parkinson’s Disease
por: Chi, Jieshan, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_avfeqr2n8drgi60d2v75d91auc