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Data on transcriptome profiling of circulating microRNAs in dairy cattle

MicroRNA (miRNA) are found in numerous biofluids including blood and are considered a new class of biomarkers. The data presented here are related to the research article entitled “Profiling and identification of pregnancy-associated circulating microRNAs in dairy cattle” (Markkandan et al. 2018). I...

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Autores principales: Markkandan, Kesavan, Lim, Hyun-joo, Lee, Dong Jin, Shin, In-gang, Yoo, Seung-il, Dang, Changgwon, Hong, Chang Pyo, Ahn, Kung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6216090/
https://www.ncbi.nlm.nih.gov/pubmed/30417039
http://dx.doi.org/10.1016/j.dib.2018.09.038
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author Markkandan, Kesavan
Lim, Hyun-joo
Lee, Dong Jin
Shin, In-gang
Yoo, Seung-il
Dang, Changgwon
Hong, Chang Pyo
Ahn, Kung
author_facet Markkandan, Kesavan
Lim, Hyun-joo
Lee, Dong Jin
Shin, In-gang
Yoo, Seung-il
Dang, Changgwon
Hong, Chang Pyo
Ahn, Kung
author_sort Markkandan, Kesavan
collection PubMed
description MicroRNA (miRNA) are found in numerous biofluids including blood and are considered a new class of biomarkers. The data presented here are related to the research article entitled “Profiling and identification of pregnancy-associated circulating microRNAs in dairy cattle” (Markkandan et al. 2018). In the cited article, we sequenced the circulating microRNAs of the three healthy dairy cows of normal and 30 days of pregnancy (DOP) using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis between normal and pregnant samples showed perturbations in miRNA expression. Herein, we made a comparison of DEGs at normal and 60 DOP libraries. The analysis results showed that 147 known miRNAs were differently expressed at 60 DOP groups when compared to the normal group. In addition, stage specific miRNAs were also predicted.
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spelling pubmed-62160902018-11-09 Data on transcriptome profiling of circulating microRNAs in dairy cattle Markkandan, Kesavan Lim, Hyun-joo Lee, Dong Jin Shin, In-gang Yoo, Seung-il Dang, Changgwon Hong, Chang Pyo Ahn, Kung Data Brief Agricultural and Biological Science MicroRNA (miRNA) are found in numerous biofluids including blood and are considered a new class of biomarkers. The data presented here are related to the research article entitled “Profiling and identification of pregnancy-associated circulating microRNAs in dairy cattle” (Markkandan et al. 2018). In the cited article, we sequenced the circulating microRNAs of the three healthy dairy cows of normal and 30 days of pregnancy (DOP) using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis between normal and pregnant samples showed perturbations in miRNA expression. Herein, we made a comparison of DEGs at normal and 60 DOP libraries. The analysis results showed that 147 known miRNAs were differently expressed at 60 DOP groups when compared to the normal group. In addition, stage specific miRNAs were also predicted. Elsevier 2018-09-18 /pmc/articles/PMC6216090/ /pubmed/30417039 http://dx.doi.org/10.1016/j.dib.2018.09.038 Text en © 2018 Published by Elsevier Inc. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Agricultural and Biological Science
Markkandan, Kesavan
Lim, Hyun-joo
Lee, Dong Jin
Shin, In-gang
Yoo, Seung-il
Dang, Changgwon
Hong, Chang Pyo
Ahn, Kung
Data on transcriptome profiling of circulating microRNAs in dairy cattle
title Data on transcriptome profiling of circulating microRNAs in dairy cattle
title_full Data on transcriptome profiling of circulating microRNAs in dairy cattle
title_fullStr Data on transcriptome profiling of circulating microRNAs in dairy cattle
title_full_unstemmed Data on transcriptome profiling of circulating microRNAs in dairy cattle
title_short Data on transcriptome profiling of circulating microRNAs in dairy cattle
title_sort data on transcriptome profiling of circulating micrornas in dairy cattle
topic Agricultural and Biological Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6216090/
https://www.ncbi.nlm.nih.gov/pubmed/30417039
http://dx.doi.org/10.1016/j.dib.2018.09.038
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