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Data on transcriptome profiling of circulating microRNAs in dairy cattle
MicroRNA (miRNA) are found in numerous biofluids including blood and are considered a new class of biomarkers. The data presented here are related to the research article entitled “Profiling and identification of pregnancy-associated circulating microRNAs in dairy cattle” (Markkandan et al. 2018). I...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6216090/ https://www.ncbi.nlm.nih.gov/pubmed/30417039 http://dx.doi.org/10.1016/j.dib.2018.09.038 |
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author | Markkandan, Kesavan Lim, Hyun-joo Lee, Dong Jin Shin, In-gang Yoo, Seung-il Dang, Changgwon Hong, Chang Pyo Ahn, Kung |
author_facet | Markkandan, Kesavan Lim, Hyun-joo Lee, Dong Jin Shin, In-gang Yoo, Seung-il Dang, Changgwon Hong, Chang Pyo Ahn, Kung |
author_sort | Markkandan, Kesavan |
collection | PubMed |
description | MicroRNA (miRNA) are found in numerous biofluids including blood and are considered a new class of biomarkers. The data presented here are related to the research article entitled “Profiling and identification of pregnancy-associated circulating microRNAs in dairy cattle” (Markkandan et al. 2018). In the cited article, we sequenced the circulating microRNAs of the three healthy dairy cows of normal and 30 days of pregnancy (DOP) using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis between normal and pregnant samples showed perturbations in miRNA expression. Herein, we made a comparison of DEGs at normal and 60 DOP libraries. The analysis results showed that 147 known miRNAs were differently expressed at 60 DOP groups when compared to the normal group. In addition, stage specific miRNAs were also predicted. |
format | Online Article Text |
id | pubmed-6216090 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-62160902018-11-09 Data on transcriptome profiling of circulating microRNAs in dairy cattle Markkandan, Kesavan Lim, Hyun-joo Lee, Dong Jin Shin, In-gang Yoo, Seung-il Dang, Changgwon Hong, Chang Pyo Ahn, Kung Data Brief Agricultural and Biological Science MicroRNA (miRNA) are found in numerous biofluids including blood and are considered a new class of biomarkers. The data presented here are related to the research article entitled “Profiling and identification of pregnancy-associated circulating microRNAs in dairy cattle” (Markkandan et al. 2018). In the cited article, we sequenced the circulating microRNAs of the three healthy dairy cows of normal and 30 days of pregnancy (DOP) using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis between normal and pregnant samples showed perturbations in miRNA expression. Herein, we made a comparison of DEGs at normal and 60 DOP libraries. The analysis results showed that 147 known miRNAs were differently expressed at 60 DOP groups when compared to the normal group. In addition, stage specific miRNAs were also predicted. Elsevier 2018-09-18 /pmc/articles/PMC6216090/ /pubmed/30417039 http://dx.doi.org/10.1016/j.dib.2018.09.038 Text en © 2018 Published by Elsevier Inc. http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Agricultural and Biological Science Markkandan, Kesavan Lim, Hyun-joo Lee, Dong Jin Shin, In-gang Yoo, Seung-il Dang, Changgwon Hong, Chang Pyo Ahn, Kung Data on transcriptome profiling of circulating microRNAs in dairy cattle |
title | Data on transcriptome profiling of circulating microRNAs in dairy cattle |
title_full | Data on transcriptome profiling of circulating microRNAs in dairy cattle |
title_fullStr | Data on transcriptome profiling of circulating microRNAs in dairy cattle |
title_full_unstemmed | Data on transcriptome profiling of circulating microRNAs in dairy cattle |
title_short | Data on transcriptome profiling of circulating microRNAs in dairy cattle |
title_sort | data on transcriptome profiling of circulating micrornas in dairy cattle |
topic | Agricultural and Biological Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6216090/ https://www.ncbi.nlm.nih.gov/pubmed/30417039 http://dx.doi.org/10.1016/j.dib.2018.09.038 |
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