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Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexahydro-1H-isoindole-1,3(2H)-dione
The title compound, C(13)H(16)N(2)O(4), crystallizes in the monoclinic centrosymmetric space group, P2(1)/c, with four molecules in the asymmetric unit, thus there is no crystallographically imposed symmetry and it is a racemic mixture. The structure consists of a six-membered unsaturated ring boun...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6218906/ https://www.ncbi.nlm.nih.gov/pubmed/30443388 http://dx.doi.org/10.1107/S2056989018014317 |
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author | Hijji, Yousef Benjamin, Ellis Jasinski, Jerry P. Butcher, Ray J. |
author_facet | Hijji, Yousef Benjamin, Ellis Jasinski, Jerry P. Butcher, Ray J. |
author_sort | Hijji, Yousef |
collection | PubMed |
description | The title compound, C(13)H(16)N(2)O(4), crystallizes in the monoclinic centrosymmetric space group, P2(1)/c, with four molecules in the asymmetric unit, thus there is no crystallographically imposed symmetry and it is a racemic mixture. The structure consists of a six-membered unsaturated ring bound to a five-membered pyrrolidine-2,5-dione ring N-bound to a six-membered piperidine-2,6-dione ring and thus has the same basic skeleton as thalidomide, except for the six-membered unsaturated ring substituted for the aromatic ring. In the crystal, the molecules are linked into inversion dimers by R (2) (2)(8) hydrogen bonding involving the N—H group. In addition, there are bifurcated C—H⋯O interactions involving one of the O atoms on the pyrrolidine-2,5-dione with graph-set notation R (1) (2)(5). These interactions along with C—H⋯O interactions involving one of the O atoms on the piperidine-2,6-dione ring link the molecules into a complex three-dimensional array. There is pseudomerohedral twinning present which results from a 180° rotation about the [100] reciprocal lattice direction and with a twin law of 1 0 0 0 [Image: see text] 0 0 0 [Image: see text] [BASF 0.044 (1)]. |
format | Online Article Text |
id | pubmed-6218906 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-62189062018-11-15 Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexahydro-1H-isoindole-1,3(2H)-dione Hijji, Yousef Benjamin, Ellis Jasinski, Jerry P. Butcher, Ray J. Acta Crystallogr E Crystallogr Commun Research Communications The title compound, C(13)H(16)N(2)O(4), crystallizes in the monoclinic centrosymmetric space group, P2(1)/c, with four molecules in the asymmetric unit, thus there is no crystallographically imposed symmetry and it is a racemic mixture. The structure consists of a six-membered unsaturated ring bound to a five-membered pyrrolidine-2,5-dione ring N-bound to a six-membered piperidine-2,6-dione ring and thus has the same basic skeleton as thalidomide, except for the six-membered unsaturated ring substituted for the aromatic ring. In the crystal, the molecules are linked into inversion dimers by R (2) (2)(8) hydrogen bonding involving the N—H group. In addition, there are bifurcated C—H⋯O interactions involving one of the O atoms on the pyrrolidine-2,5-dione with graph-set notation R (1) (2)(5). These interactions along with C—H⋯O interactions involving one of the O atoms on the piperidine-2,6-dione ring link the molecules into a complex three-dimensional array. There is pseudomerohedral twinning present which results from a 180° rotation about the [100] reciprocal lattice direction and with a twin law of 1 0 0 0 [Image: see text] 0 0 0 [Image: see text] [BASF 0.044 (1)]. International Union of Crystallography 2018-10-16 /pmc/articles/PMC6218906/ /pubmed/30443388 http://dx.doi.org/10.1107/S2056989018014317 Text en © Hijji et al. 2018 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/ |
spellingShingle | Research Communications Hijji, Yousef Benjamin, Ellis Jasinski, Jerry P. Butcher, Ray J. Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexahydro-1H-isoindole-1,3(2H)-dione |
title | Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexahydro-1H-isoindole-1,3(2H)-dione |
title_full | Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexahydro-1H-isoindole-1,3(2H)-dione |
title_fullStr | Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexahydro-1H-isoindole-1,3(2H)-dione |
title_full_unstemmed | Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexahydro-1H-isoindole-1,3(2H)-dione |
title_short | Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexahydro-1H-isoindole-1,3(2H)-dione |
title_sort | crystal structure of the thalidomide analog (3ar*,7as*)-2-(2,6-dioxopiperidin-3-yl)hexahydro-1h-isoindole-1,3(2h)-dione |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6218906/ https://www.ncbi.nlm.nih.gov/pubmed/30443388 http://dx.doi.org/10.1107/S2056989018014317 |
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