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Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexa­hydro-1H-iso­indole-1,3(2H)-dione

The title compound, C(13)H(16)N(2)O(4), crystallizes in the monoclinic centrosymmetric space group, P2(1)/c, with four mol­ecules in the asymmetric unit, thus there is no crystallographically imposed symmetry and it is a racemic mixture. The structure consists of a six-membered unsaturated ring boun...

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Autores principales: Hijji, Yousef, Benjamin, Ellis, Jasinski, Jerry P., Butcher, Ray J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6218906/
https://www.ncbi.nlm.nih.gov/pubmed/30443388
http://dx.doi.org/10.1107/S2056989018014317
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author Hijji, Yousef
Benjamin, Ellis
Jasinski, Jerry P.
Butcher, Ray J.
author_facet Hijji, Yousef
Benjamin, Ellis
Jasinski, Jerry P.
Butcher, Ray J.
author_sort Hijji, Yousef
collection PubMed
description The title compound, C(13)H(16)N(2)O(4), crystallizes in the monoclinic centrosymmetric space group, P2(1)/c, with four mol­ecules in the asymmetric unit, thus there is no crystallographically imposed symmetry and it is a racemic mixture. The structure consists of a six-membered unsaturated ring bound to a five-membered pyrrolidine-2,5-dione ring N-bound to a six-membered piperidine-2,6-dione ring and thus has the same basic skeleton as thalidomide, except for the six-membered unsaturated ring substituted for the aromatic ring. In the crystal, the mol­ecules are linked into inversion dimers by R (2) (2)(8) hydrogen bonding involving the N—H group. In addition, there are bifurcated C—H⋯O inter­actions involving one of the O atoms on the pyrrolidine-2,5-dione with graph-set notation R (1) (2)(5). These inter­actions along with C—H⋯O inter­actions involving one of the O atoms on the piperidine-2,6-dione ring link the mol­ecules into a complex three-dimensional array. There is pseudomerohedral twinning present which results from a 180° rotation about the [100] reciprocal lattice direction and with a twin law of 1 0 0 0 [Image: see text] 0 0 0 [Image: see text] [BASF 0.044 (1)].
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spelling pubmed-62189062018-11-15 Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexa­hydro-1H-iso­indole-1,3(2H)-dione Hijji, Yousef Benjamin, Ellis Jasinski, Jerry P. Butcher, Ray J. Acta Crystallogr E Crystallogr Commun Research Communications The title compound, C(13)H(16)N(2)O(4), crystallizes in the monoclinic centrosymmetric space group, P2(1)/c, with four mol­ecules in the asymmetric unit, thus there is no crystallographically imposed symmetry and it is a racemic mixture. The structure consists of a six-membered unsaturated ring bound to a five-membered pyrrolidine-2,5-dione ring N-bound to a six-membered piperidine-2,6-dione ring and thus has the same basic skeleton as thalidomide, except for the six-membered unsaturated ring substituted for the aromatic ring. In the crystal, the mol­ecules are linked into inversion dimers by R (2) (2)(8) hydrogen bonding involving the N—H group. In addition, there are bifurcated C—H⋯O inter­actions involving one of the O atoms on the pyrrolidine-2,5-dione with graph-set notation R (1) (2)(5). These inter­actions along with C—H⋯O inter­actions involving one of the O atoms on the piperidine-2,6-dione ring link the mol­ecules into a complex three-dimensional array. There is pseudomerohedral twinning present which results from a 180° rotation about the [100] reciprocal lattice direction and with a twin law of 1 0 0 0 [Image: see text] 0 0 0 [Image: see text] [BASF 0.044 (1)]. International Union of Crystallography 2018-10-16 /pmc/articles/PMC6218906/ /pubmed/30443388 http://dx.doi.org/10.1107/S2056989018014317 Text en © Hijji et al. 2018 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/
spellingShingle Research Communications
Hijji, Yousef
Benjamin, Ellis
Jasinski, Jerry P.
Butcher, Ray J.
Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexa­hydro-1H-iso­indole-1,3(2H)-dione
title Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexa­hydro-1H-iso­indole-1,3(2H)-dione
title_full Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexa­hydro-1H-iso­indole-1,3(2H)-dione
title_fullStr Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexa­hydro-1H-iso­indole-1,3(2H)-dione
title_full_unstemmed Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexa­hydro-1H-iso­indole-1,3(2H)-dione
title_short Crystal structure of the thalidomide analog (3aR*,7aS*)-2-(2,6-dioxopiperidin-3-yl)hexa­hydro-1H-iso­indole-1,3(2H)-dione
title_sort crystal structure of the thalidomide analog (3ar*,7as*)-2-(2,6-dioxopiperidin-3-yl)hexa­hydro-1h-iso­indole-1,3(2h)-dione
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6218906/
https://www.ncbi.nlm.nih.gov/pubmed/30443388
http://dx.doi.org/10.1107/S2056989018014317
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