Cargando…

Energetic Effects of a Closed System Approach Including Explicit Proton and Electron Acceptors as Demonstrated by a Mononuclear Ruthenium Water Oxidation Catalyst

When considering water oxidation catalysis theoretically, accounting for the transfer of protons and electrons from one catalytic intermediate to the next remains challenging: correction factors are usually employed to approximate the energetics of electron and proton transfer. Here these energetics...

Descripción completa

Detalles Bibliográficos
Autores principales: de Ruiter, Jessica M., de Groot, Huub J. M., Buda, Francesco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6221022/
https://www.ncbi.nlm.nih.gov/pubmed/30450133
http://dx.doi.org/10.1002/cctc.201801093
_version_ 1783368939706777600
author de Ruiter, Jessica M.
de Groot, Huub J. M.
Buda, Francesco
author_facet de Ruiter, Jessica M.
de Groot, Huub J. M.
Buda, Francesco
author_sort de Ruiter, Jessica M.
collection PubMed
description When considering water oxidation catalysis theoretically, accounting for the transfer of protons and electrons from one catalytic intermediate to the next remains challenging: correction factors are usually employed to approximate the energetics of electron and proton transfer. Here these energetics were investigated using a closed system approach, which places the catalytic intermediate in a simulation box including proton and electron acceptors, as well as explicit solvent. As a proof of principle, the first two catalytic steps of the mononuclear ruthenium‐based water oxidation catalyst [Ru(cy)(bpy)(H(2)O)](2+) were examined using Car‐Parrinello Molecular Dynamics. This investigation shows that this approach offers added insight, not only into the free energy profile between two stable intermediates, but also into how the solvent environment impacts this dynamic evolution.
format Online
Article
Text
id pubmed-6221022
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-62210222018-11-15 Energetic Effects of a Closed System Approach Including Explicit Proton and Electron Acceptors as Demonstrated by a Mononuclear Ruthenium Water Oxidation Catalyst de Ruiter, Jessica M. de Groot, Huub J. M. Buda, Francesco ChemCatChem Full Papers When considering water oxidation catalysis theoretically, accounting for the transfer of protons and electrons from one catalytic intermediate to the next remains challenging: correction factors are usually employed to approximate the energetics of electron and proton transfer. Here these energetics were investigated using a closed system approach, which places the catalytic intermediate in a simulation box including proton and electron acceptors, as well as explicit solvent. As a proof of principle, the first two catalytic steps of the mononuclear ruthenium‐based water oxidation catalyst [Ru(cy)(bpy)(H(2)O)](2+) were examined using Car‐Parrinello Molecular Dynamics. This investigation shows that this approach offers added insight, not only into the free energy profile between two stable intermediates, but also into how the solvent environment impacts this dynamic evolution. John Wiley and Sons Inc. 2018-08-28 2018-10-23 /pmc/articles/PMC6221022/ /pubmed/30450133 http://dx.doi.org/10.1002/cctc.201801093 Text en © 2018 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Full Papers
de Ruiter, Jessica M.
de Groot, Huub J. M.
Buda, Francesco
Energetic Effects of a Closed System Approach Including Explicit Proton and Electron Acceptors as Demonstrated by a Mononuclear Ruthenium Water Oxidation Catalyst
title Energetic Effects of a Closed System Approach Including Explicit Proton and Electron Acceptors as Demonstrated by a Mononuclear Ruthenium Water Oxidation Catalyst
title_full Energetic Effects of a Closed System Approach Including Explicit Proton and Electron Acceptors as Demonstrated by a Mononuclear Ruthenium Water Oxidation Catalyst
title_fullStr Energetic Effects of a Closed System Approach Including Explicit Proton and Electron Acceptors as Demonstrated by a Mononuclear Ruthenium Water Oxidation Catalyst
title_full_unstemmed Energetic Effects of a Closed System Approach Including Explicit Proton and Electron Acceptors as Demonstrated by a Mononuclear Ruthenium Water Oxidation Catalyst
title_short Energetic Effects of a Closed System Approach Including Explicit Proton and Electron Acceptors as Demonstrated by a Mononuclear Ruthenium Water Oxidation Catalyst
title_sort energetic effects of a closed system approach including explicit proton and electron acceptors as demonstrated by a mononuclear ruthenium water oxidation catalyst
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6221022/
https://www.ncbi.nlm.nih.gov/pubmed/30450133
http://dx.doi.org/10.1002/cctc.201801093
work_keys_str_mv AT deruiterjessicam energeticeffectsofaclosedsystemapproachincludingexplicitprotonandelectronacceptorsasdemonstratedbyamononuclearrutheniumwateroxidationcatalyst
AT degroothuubjm energeticeffectsofaclosedsystemapproachincludingexplicitprotonandelectronacceptorsasdemonstratedbyamononuclearrutheniumwateroxidationcatalyst
AT budafrancesco energeticeffectsofaclosedsystemapproachincludingexplicitprotonandelectronacceptorsasdemonstratedbyamononuclearrutheniumwateroxidationcatalyst