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Variation at the TRIM11 locus modifies progressive supranuclear palsy phenotype

OBJECTIVE: The basis for clinical variation related to underlying progressive supranuclear palsy (PSP) pathology is unknown. We performed a genome‐wide association study (GWAS) to identify genetic determinants of PSP phenotype. METHODS: Two independent pathological and clinically diagnosed PSP cohor...

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Autores principales: Jabbari, Edwin, Woodside, John, Tan, Manuela M. X., Shoai, Maryam, Pittman, Alan, Ferrari, Raffaele, Mok, Kin Y., Zhang, David, Reynolds, Regina H., de Silva, Rohan, Grimm, Max‐Joseph, Respondek, Gesine, Müller, Ulrich, Al‐Sarraj, Safa, Gentleman, Stephen M., Lees, Andrew J., Warner, Thomas T., Hardy, John, Revesz, Tamas, Höglinger, Günter U., Holton, Janice L., Ryten, Mina, Morris, Huw R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6221133/
https://www.ncbi.nlm.nih.gov/pubmed/30066433
http://dx.doi.org/10.1002/ana.25308
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author Jabbari, Edwin
Woodside, John
Tan, Manuela M. X.
Shoai, Maryam
Pittman, Alan
Ferrari, Raffaele
Mok, Kin Y.
Zhang, David
Reynolds, Regina H.
de Silva, Rohan
Grimm, Max‐Joseph
Respondek, Gesine
Müller, Ulrich
Al‐Sarraj, Safa
Gentleman, Stephen M.
Lees, Andrew J.
Warner, Thomas T.
Hardy, John
Revesz, Tamas
Höglinger, Günter U.
Holton, Janice L.
Ryten, Mina
Morris, Huw R.
author_facet Jabbari, Edwin
Woodside, John
Tan, Manuela M. X.
Shoai, Maryam
Pittman, Alan
Ferrari, Raffaele
Mok, Kin Y.
Zhang, David
Reynolds, Regina H.
de Silva, Rohan
Grimm, Max‐Joseph
Respondek, Gesine
Müller, Ulrich
Al‐Sarraj, Safa
Gentleman, Stephen M.
Lees, Andrew J.
Warner, Thomas T.
Hardy, John
Revesz, Tamas
Höglinger, Günter U.
Holton, Janice L.
Ryten, Mina
Morris, Huw R.
author_sort Jabbari, Edwin
collection PubMed
description OBJECTIVE: The basis for clinical variation related to underlying progressive supranuclear palsy (PSP) pathology is unknown. We performed a genome‐wide association study (GWAS) to identify genetic determinants of PSP phenotype. METHODS: Two independent pathological and clinically diagnosed PSP cohorts were genotyped and phenotyped to create Richardson syndrome (RS) and non‐RS groups. We carried out separate logistic regression GWASs to compare RS and non‐RS groups and then combined datasets to carry out a whole cohort analysis (RS = 367, non‐RS = 130). We validated our findings in a third cohort by referring to data from 100 deeply phenotyped cases from a recent GWAS. We assessed the expression/coexpression patterns of our identified genes and used our data to carry out gene‐based association testing. RESULTS: Our lead single nucleotide polymorphism (SNP), rs564309, showed an association signal in both cohorts, reaching genome‐wide significance in our whole cohort analysis (odds ratio = 5.5, 95% confidence interval = 3.2–10.0, p = 1.7 × 10(−9)). rs564309 is an intronic variant of the tripartite motif‐containing protein 11 (TRIM11) gene, a component of the ubiquitin proteasome system (UPS). In our third cohort, minor allele frequencies of surrogate SNPs in high linkage disequilibrium with rs564309 replicated our findings. Gene‐based association testing confirmed an association signal at TRIM11. We found that TRIM11 is predominantly expressed neuronally, in the cerebellum and basal ganglia. INTERPRETATION: Our study suggests that the TRIM11 locus is a genetic modifier of PSP phenotype and potentially adds further evidence for the UPS having a key role in tau pathology, therefore representing a target for disease‐modifying therapies. Ann Neurol 2018;84:485–496
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spelling pubmed-62211332018-11-15 Variation at the TRIM11 locus modifies progressive supranuclear palsy phenotype Jabbari, Edwin Woodside, John Tan, Manuela M. X. Shoai, Maryam Pittman, Alan Ferrari, Raffaele Mok, Kin Y. Zhang, David Reynolds, Regina H. de Silva, Rohan Grimm, Max‐Joseph Respondek, Gesine Müller, Ulrich Al‐Sarraj, Safa Gentleman, Stephen M. Lees, Andrew J. Warner, Thomas T. Hardy, John Revesz, Tamas Höglinger, Günter U. Holton, Janice L. Ryten, Mina Morris, Huw R. Ann Neurol Research Articles OBJECTIVE: The basis for clinical variation related to underlying progressive supranuclear palsy (PSP) pathology is unknown. We performed a genome‐wide association study (GWAS) to identify genetic determinants of PSP phenotype. METHODS: Two independent pathological and clinically diagnosed PSP cohorts were genotyped and phenotyped to create Richardson syndrome (RS) and non‐RS groups. We carried out separate logistic regression GWASs to compare RS and non‐RS groups and then combined datasets to carry out a whole cohort analysis (RS = 367, non‐RS = 130). We validated our findings in a third cohort by referring to data from 100 deeply phenotyped cases from a recent GWAS. We assessed the expression/coexpression patterns of our identified genes and used our data to carry out gene‐based association testing. RESULTS: Our lead single nucleotide polymorphism (SNP), rs564309, showed an association signal in both cohorts, reaching genome‐wide significance in our whole cohort analysis (odds ratio = 5.5, 95% confidence interval = 3.2–10.0, p = 1.7 × 10(−9)). rs564309 is an intronic variant of the tripartite motif‐containing protein 11 (TRIM11) gene, a component of the ubiquitin proteasome system (UPS). In our third cohort, minor allele frequencies of surrogate SNPs in high linkage disequilibrium with rs564309 replicated our findings. Gene‐based association testing confirmed an association signal at TRIM11. We found that TRIM11 is predominantly expressed neuronally, in the cerebellum and basal ganglia. INTERPRETATION: Our study suggests that the TRIM11 locus is a genetic modifier of PSP phenotype and potentially adds further evidence for the UPS having a key role in tau pathology, therefore representing a target for disease‐modifying therapies. Ann Neurol 2018;84:485–496 John Wiley and Sons Inc. 2018-09-15 2018-10 /pmc/articles/PMC6221133/ /pubmed/30066433 http://dx.doi.org/10.1002/ana.25308 Text en © 2018 The Authors. Annals of Neurology published by Wiley Periodicals, Inc. on behalf of American Neurological Association. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Jabbari, Edwin
Woodside, John
Tan, Manuela M. X.
Shoai, Maryam
Pittman, Alan
Ferrari, Raffaele
Mok, Kin Y.
Zhang, David
Reynolds, Regina H.
de Silva, Rohan
Grimm, Max‐Joseph
Respondek, Gesine
Müller, Ulrich
Al‐Sarraj, Safa
Gentleman, Stephen M.
Lees, Andrew J.
Warner, Thomas T.
Hardy, John
Revesz, Tamas
Höglinger, Günter U.
Holton, Janice L.
Ryten, Mina
Morris, Huw R.
Variation at the TRIM11 locus modifies progressive supranuclear palsy phenotype
title Variation at the TRIM11 locus modifies progressive supranuclear palsy phenotype
title_full Variation at the TRIM11 locus modifies progressive supranuclear palsy phenotype
title_fullStr Variation at the TRIM11 locus modifies progressive supranuclear palsy phenotype
title_full_unstemmed Variation at the TRIM11 locus modifies progressive supranuclear palsy phenotype
title_short Variation at the TRIM11 locus modifies progressive supranuclear palsy phenotype
title_sort variation at the trim11 locus modifies progressive supranuclear palsy phenotype
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6221133/
https://www.ncbi.nlm.nih.gov/pubmed/30066433
http://dx.doi.org/10.1002/ana.25308
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