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Statistical methods for constructing disease comorbidity networks from longitudinal inpatient data
Tools from network science can be utilized to study relations between diseases. Different studies focus on different types of inter-disease linkages. One of them is the comorbidity patterns derived from large-scale longitudinal data of hospital discharge records. Researchers seek to describe comorbi...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6223974/ https://www.ncbi.nlm.nih.gov/pubmed/30465022 http://dx.doi.org/10.1007/s41109-018-0101-4 |
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author | Fotouhi, Babak Momeni, Naghmeh Riolo, Maria A. Buckeridge, David L. |
author_facet | Fotouhi, Babak Momeni, Naghmeh Riolo, Maria A. Buckeridge, David L. |
author_sort | Fotouhi, Babak |
collection | PubMed |
description | Tools from network science can be utilized to study relations between diseases. Different studies focus on different types of inter-disease linkages. One of them is the comorbidity patterns derived from large-scale longitudinal data of hospital discharge records. Researchers seek to describe comorbidity relations as a network to characterize pathways of disease progressions and to predict future risks. The first step in such studies is the construction of the network itself, which subsequent analyses rest upon. There are different ways to build such a network. In this paper, we provide an overview of several existing statistical approaches in network science applicable to weighted directed networks. We discuss the differences between the null models that these models assume and their applications. We apply these methods to the inpatient data of approximately one million people, spanning approximately 17 years, pertaining to the Montreal Census Metropolitan Area. We discuss the differences in the structure of the networks built by different methods, and different features of the comorbidity relations that they extract. We also present several example applications of these methods. |
format | Online Article Text |
id | pubmed-6223974 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-62239742018-11-19 Statistical methods for constructing disease comorbidity networks from longitudinal inpatient data Fotouhi, Babak Momeni, Naghmeh Riolo, Maria A. Buckeridge, David L. Appl Netw Sci Research Tools from network science can be utilized to study relations between diseases. Different studies focus on different types of inter-disease linkages. One of them is the comorbidity patterns derived from large-scale longitudinal data of hospital discharge records. Researchers seek to describe comorbidity relations as a network to characterize pathways of disease progressions and to predict future risks. The first step in such studies is the construction of the network itself, which subsequent analyses rest upon. There are different ways to build such a network. In this paper, we provide an overview of several existing statistical approaches in network science applicable to weighted directed networks. We discuss the differences between the null models that these models assume and their applications. We apply these methods to the inpatient data of approximately one million people, spanning approximately 17 years, pertaining to the Montreal Census Metropolitan Area. We discuss the differences in the structure of the networks built by different methods, and different features of the comorbidity relations that they extract. We also present several example applications of these methods. Springer International Publishing 2018-11-07 2018 /pmc/articles/PMC6223974/ /pubmed/30465022 http://dx.doi.org/10.1007/s41109-018-0101-4 Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Research Fotouhi, Babak Momeni, Naghmeh Riolo, Maria A. Buckeridge, David L. Statistical methods for constructing disease comorbidity networks from longitudinal inpatient data |
title | Statistical methods for constructing disease comorbidity networks from longitudinal inpatient data |
title_full | Statistical methods for constructing disease comorbidity networks from longitudinal inpatient data |
title_fullStr | Statistical methods for constructing disease comorbidity networks from longitudinal inpatient data |
title_full_unstemmed | Statistical methods for constructing disease comorbidity networks from longitudinal inpatient data |
title_short | Statistical methods for constructing disease comorbidity networks from longitudinal inpatient data |
title_sort | statistical methods for constructing disease comorbidity networks from longitudinal inpatient data |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6223974/ https://www.ncbi.nlm.nih.gov/pubmed/30465022 http://dx.doi.org/10.1007/s41109-018-0101-4 |
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