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Identification of key pathways and metabolic fingerprints of longevity in C. elegans

Impaired insulin/IGF-1 signaling (IIS) and caloric restriction (CR) prolong lifespan in the nematode C. elegans. However, a cross comparison of these longevity pathways using a multi-omics integration approach is lacking. In this study, we aimed to identify key pathways and metabolite fingerprints o...

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Autores principales: Gao, Arwen W., Smith, Reuben L., van Weeghel, Michel, Kamble, Rashmi, Janssens, Georges E., Houtkooper, Riekelt H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6224709/
https://www.ncbi.nlm.nih.gov/pubmed/30300667
http://dx.doi.org/10.1016/j.exger.2018.10.003
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author Gao, Arwen W.
Smith, Reuben L.
van Weeghel, Michel
Kamble, Rashmi
Janssens, Georges E.
Houtkooper, Riekelt H.
author_facet Gao, Arwen W.
Smith, Reuben L.
van Weeghel, Michel
Kamble, Rashmi
Janssens, Georges E.
Houtkooper, Riekelt H.
author_sort Gao, Arwen W.
collection PubMed
description Impaired insulin/IGF-1 signaling (IIS) and caloric restriction (CR) prolong lifespan in the nematode C. elegans. However, a cross comparison of these longevity pathways using a multi-omics integration approach is lacking. In this study, we aimed to identify key pathways and metabolite fingerprints of longevity that are shared between IIS and CR worm models using multi-omics integration. We generated transcriptomics and metabolomics data from long-lived worm strains, i.e. daf-2 (impaired IIS) and eat-2 (CR model) and compared them with the wild-type strain N2. Transcriptional profiling identified shared longevity signatures, such as an upregulation of lipid storage and defense responses, and downregulation of macromolecule synthesis and developmental processes. Metabolomics profiling identified an increase in the levels of glycerol‑3P, adenine, xanthine, and AMP, and a decrease in the levels of the amino acid pool, as well as the C18:0, C17:1, C19:1, C20:0 and C22:0 fatty acids. After we integrated transcriptomics and metabolomics data based on the annotations in KEGG, our results highlighted increased amino acid metabolism and an upregulation of purine metabolism as a commonality between the two long-lived mutants. Overall, our findings point towards the existence of shared metabolic pathways that are likely important for lifespan extension and provide novel insights into potential regulators and metabolic fingerprints for longevity.
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spelling pubmed-62247092018-11-13 Identification of key pathways and metabolic fingerprints of longevity in C. elegans Gao, Arwen W. Smith, Reuben L. van Weeghel, Michel Kamble, Rashmi Janssens, Georges E. Houtkooper, Riekelt H. Exp Gerontol Article Impaired insulin/IGF-1 signaling (IIS) and caloric restriction (CR) prolong lifespan in the nematode C. elegans. However, a cross comparison of these longevity pathways using a multi-omics integration approach is lacking. In this study, we aimed to identify key pathways and metabolite fingerprints of longevity that are shared between IIS and CR worm models using multi-omics integration. We generated transcriptomics and metabolomics data from long-lived worm strains, i.e. daf-2 (impaired IIS) and eat-2 (CR model) and compared them with the wild-type strain N2. Transcriptional profiling identified shared longevity signatures, such as an upregulation of lipid storage and defense responses, and downregulation of macromolecule synthesis and developmental processes. Metabolomics profiling identified an increase in the levels of glycerol‑3P, adenine, xanthine, and AMP, and a decrease in the levels of the amino acid pool, as well as the C18:0, C17:1, C19:1, C20:0 and C22:0 fatty acids. After we integrated transcriptomics and metabolomics data based on the annotations in KEGG, our results highlighted increased amino acid metabolism and an upregulation of purine metabolism as a commonality between the two long-lived mutants. Overall, our findings point towards the existence of shared metabolic pathways that are likely important for lifespan extension and provide novel insights into potential regulators and metabolic fingerprints for longevity. Elsevier Science 2018-11 /pmc/articles/PMC6224709/ /pubmed/30300667 http://dx.doi.org/10.1016/j.exger.2018.10.003 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Gao, Arwen W.
Smith, Reuben L.
van Weeghel, Michel
Kamble, Rashmi
Janssens, Georges E.
Houtkooper, Riekelt H.
Identification of key pathways and metabolic fingerprints of longevity in C. elegans
title Identification of key pathways and metabolic fingerprints of longevity in C. elegans
title_full Identification of key pathways and metabolic fingerprints of longevity in C. elegans
title_fullStr Identification of key pathways and metabolic fingerprints of longevity in C. elegans
title_full_unstemmed Identification of key pathways and metabolic fingerprints of longevity in C. elegans
title_short Identification of key pathways and metabolic fingerprints of longevity in C. elegans
title_sort identification of key pathways and metabolic fingerprints of longevity in c. elegans
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6224709/
https://www.ncbi.nlm.nih.gov/pubmed/30300667
http://dx.doi.org/10.1016/j.exger.2018.10.003
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