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Electronic Effect on the Molecular Motion of Aromatic Amides: Combined Studies Using VT-NMR and Quantum Calculations

Rotational barrier energy studies to date have focused on the amide bond of aromatic compounds from a kinetic perspective using quantum calculations and nuclear magnetic resonance (NMR). These studies provide valuable information, not only regarding the basic conformational properties of amide bonds...

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Autores principales: Kim, Sungsoo, Kim, Jungyu, Kim, Jieun, Won, Daeun, Chang, Suk-Kyu, Cha, Wansik, Jeong, Keunhong, Ahn, Sangdoo, Kwak, Kyungwon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6225462/
https://www.ncbi.nlm.nih.gov/pubmed/30205542
http://dx.doi.org/10.3390/molecules23092294
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author Kim, Sungsoo
Kim, Jungyu
Kim, Jieun
Won, Daeun
Chang, Suk-Kyu
Cha, Wansik
Jeong, Keunhong
Ahn, Sangdoo
Kwak, Kyungwon
author_facet Kim, Sungsoo
Kim, Jungyu
Kim, Jieun
Won, Daeun
Chang, Suk-Kyu
Cha, Wansik
Jeong, Keunhong
Ahn, Sangdoo
Kwak, Kyungwon
author_sort Kim, Sungsoo
collection PubMed
description Rotational barrier energy studies to date have focused on the amide bond of aromatic compounds from a kinetic perspective using quantum calculations and nuclear magnetic resonance (NMR). These studies provide valuable information, not only regarding the basic conformational properties of amide bonds but also the molecular gear system, which has recently gained interest. Thus, we investigate the precise motion of the amide bonds of two aromatic compounds using an experimental rotational barrier energy estimation by NMR experiments and a theoretical evaluation of the density functional theory calculation. The theoretical potential energy surface scan method combined with the quadratic synchronous transit 3 method and consideration of additional functional group rotation with optimization and frequency calculations support the results of the variable temperature (1)H NMR, with deviations of less than 1 kcal/mol. This detailed experimental and theoretical research strongly supports molecular gear motion in the aromatic amide system, and the difference in kinetic energy indicates that the electronic effect from the aromatic structure has a key role in conformational movements at different temperatures. Our study provides an enhanced basis for future amide structural dynamics research.
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spelling pubmed-62254622018-11-13 Electronic Effect on the Molecular Motion of Aromatic Amides: Combined Studies Using VT-NMR and Quantum Calculations Kim, Sungsoo Kim, Jungyu Kim, Jieun Won, Daeun Chang, Suk-Kyu Cha, Wansik Jeong, Keunhong Ahn, Sangdoo Kwak, Kyungwon Molecules Article Rotational barrier energy studies to date have focused on the amide bond of aromatic compounds from a kinetic perspective using quantum calculations and nuclear magnetic resonance (NMR). These studies provide valuable information, not only regarding the basic conformational properties of amide bonds but also the molecular gear system, which has recently gained interest. Thus, we investigate the precise motion of the amide bonds of two aromatic compounds using an experimental rotational barrier energy estimation by NMR experiments and a theoretical evaluation of the density functional theory calculation. The theoretical potential energy surface scan method combined with the quadratic synchronous transit 3 method and consideration of additional functional group rotation with optimization and frequency calculations support the results of the variable temperature (1)H NMR, with deviations of less than 1 kcal/mol. This detailed experimental and theoretical research strongly supports molecular gear motion in the aromatic amide system, and the difference in kinetic energy indicates that the electronic effect from the aromatic structure has a key role in conformational movements at different temperatures. Our study provides an enhanced basis for future amide structural dynamics research. MDPI 2018-09-08 /pmc/articles/PMC6225462/ /pubmed/30205542 http://dx.doi.org/10.3390/molecules23092294 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kim, Sungsoo
Kim, Jungyu
Kim, Jieun
Won, Daeun
Chang, Suk-Kyu
Cha, Wansik
Jeong, Keunhong
Ahn, Sangdoo
Kwak, Kyungwon
Electronic Effect on the Molecular Motion of Aromatic Amides: Combined Studies Using VT-NMR and Quantum Calculations
title Electronic Effect on the Molecular Motion of Aromatic Amides: Combined Studies Using VT-NMR and Quantum Calculations
title_full Electronic Effect on the Molecular Motion of Aromatic Amides: Combined Studies Using VT-NMR and Quantum Calculations
title_fullStr Electronic Effect on the Molecular Motion of Aromatic Amides: Combined Studies Using VT-NMR and Quantum Calculations
title_full_unstemmed Electronic Effect on the Molecular Motion of Aromatic Amides: Combined Studies Using VT-NMR and Quantum Calculations
title_short Electronic Effect on the Molecular Motion of Aromatic Amides: Combined Studies Using VT-NMR and Quantum Calculations
title_sort electronic effect on the molecular motion of aromatic amides: combined studies using vt-nmr and quantum calculations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6225462/
https://www.ncbi.nlm.nih.gov/pubmed/30205542
http://dx.doi.org/10.3390/molecules23092294
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