Cargando…
Tuberculosis outbreak investigation using phylodynamic analysis
The fast evolution of pathogenic viruses has allowed for the development of phylodynamic approaches that extract information about the epidemiological characteristics of viral genomes. Thanks to advances in whole genome sequencing, they can be applied to slowly evolving bacterial pathogens like Myco...
Autores principales: | Kühnert, Denise, Coscolla, Mireia, Brites, Daniela, Stucki, David, Metcalfe, John, Fenner, Lukas, Gagneux, Sebastien, Stadler, Tanja |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6227250/ https://www.ncbi.nlm.nih.gov/pubmed/29880306 http://dx.doi.org/10.1016/j.epidem.2018.05.004 |
Ejemplares similares
-
Two New Rapid SNP-Typing Methods for Classifying Mycobacterium tuberculosis Complex into the Main Phylogenetic Lineages
por: Stucki, David, et al.
Publicado: (2012) -
Robust Phylodynamic Analysis of Genetic Sequencing Data from Structured Populations
por: Scire, Jérémie, et al.
Publicado: (2022) -
Phylodynamics with Migration: A Computational Framework to Quantify Population Structure from Genomic Data
por: Kühnert, Denise, et al.
Publicado: (2016) -
KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes
por: Steiner, Andreas, et al.
Publicado: (2014) -
Tuberculosis in Swiss captive Asian elephants: microevolution of Mycobacterium tuberculosis characterized by multilocus variable-number tandem-repeat analysis and whole-genome sequencing
por: Ghielmetti, Giovanni, et al.
Publicado: (2017)