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Pixel-Label-Based Segmentation of Cross-Sectional Brain MRI Using Simplified SegNet Architecture-Based CNN

Using deep neural networks for segmenting an MRI image of heterogeneously distributed pixels into a specific class assigning a label to each pixel is the concept of the proposed approach. This approach facilitates the application of the segmentation process on a preprocessed MRI image, with a traine...

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Detalles Bibliográficos
Autores principales: Khagi, Bijen, Kwon, Goo-Rak
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6230419/
https://www.ncbi.nlm.nih.gov/pubmed/30510671
http://dx.doi.org/10.1155/2018/3640705
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author Khagi, Bijen
Kwon, Goo-Rak
author_facet Khagi, Bijen
Kwon, Goo-Rak
author_sort Khagi, Bijen
collection PubMed
description Using deep neural networks for segmenting an MRI image of heterogeneously distributed pixels into a specific class assigning a label to each pixel is the concept of the proposed approach. This approach facilitates the application of the segmentation process on a preprocessed MRI image, with a trained network to be utilized for other test images. As labels are considered expensive assets in supervised training, fewer training images and training labels are used to obtain optimal accuracy. To validate the performance of the proposed approach, an experiment is conducted on other test images (available in the same database) that are not part of the training; the obtained result is of good visual quality in terms of segmentation and quite similar to the ground truth image. The average computed Dice similarity index for the test images is approximately 0.8, whereas the Jaccard similarity measure is approximately 0.6, which is better compared to other methods. This implies that the proposed method can be used to obtain reference images almost similar to the segmented ground truth images.
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spelling pubmed-62304192018-12-03 Pixel-Label-Based Segmentation of Cross-Sectional Brain MRI Using Simplified SegNet Architecture-Based CNN Khagi, Bijen Kwon, Goo-Rak J Healthc Eng Research Article Using deep neural networks for segmenting an MRI image of heterogeneously distributed pixels into a specific class assigning a label to each pixel is the concept of the proposed approach. This approach facilitates the application of the segmentation process on a preprocessed MRI image, with a trained network to be utilized for other test images. As labels are considered expensive assets in supervised training, fewer training images and training labels are used to obtain optimal accuracy. To validate the performance of the proposed approach, an experiment is conducted on other test images (available in the same database) that are not part of the training; the obtained result is of good visual quality in terms of segmentation and quite similar to the ground truth image. The average computed Dice similarity index for the test images is approximately 0.8, whereas the Jaccard similarity measure is approximately 0.6, which is better compared to other methods. This implies that the proposed method can be used to obtain reference images almost similar to the segmented ground truth images. Hindawi 2018-10-28 /pmc/articles/PMC6230419/ /pubmed/30510671 http://dx.doi.org/10.1155/2018/3640705 Text en Copyright © 2018 Bijen Khagi and Goo-Rak Kwon. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Khagi, Bijen
Kwon, Goo-Rak
Pixel-Label-Based Segmentation of Cross-Sectional Brain MRI Using Simplified SegNet Architecture-Based CNN
title Pixel-Label-Based Segmentation of Cross-Sectional Brain MRI Using Simplified SegNet Architecture-Based CNN
title_full Pixel-Label-Based Segmentation of Cross-Sectional Brain MRI Using Simplified SegNet Architecture-Based CNN
title_fullStr Pixel-Label-Based Segmentation of Cross-Sectional Brain MRI Using Simplified SegNet Architecture-Based CNN
title_full_unstemmed Pixel-Label-Based Segmentation of Cross-Sectional Brain MRI Using Simplified SegNet Architecture-Based CNN
title_short Pixel-Label-Based Segmentation of Cross-Sectional Brain MRI Using Simplified SegNet Architecture-Based CNN
title_sort pixel-label-based segmentation of cross-sectional brain mri using simplified segnet architecture-based cnn
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6230419/
https://www.ncbi.nlm.nih.gov/pubmed/30510671
http://dx.doi.org/10.1155/2018/3640705
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