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GPseudoRank: a permutation sampler for single cell orderings

MOTIVATION: A number of pseudotime methods have provided point estimates of the ordering of cells for scRNA-seq data. A still limited number of methods also model the uncertainty of the pseudotime estimate. However, there is still a need for a method to sample from complicated and multi-modal distri...

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Detalles Bibliográficos
Autores principales: Strauß, Magdalena E, Reid, John E, Wernisch, Lorenz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6230469/
https://www.ncbi.nlm.nih.gov/pubmed/30052778
http://dx.doi.org/10.1093/bioinformatics/bty664