Cargando…
Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs
The ability of deep learning architectures to identify glaucomatous optic neuropathy (GON) in fundus photographs was evaluated. A large database of fundus photographs (n = 14,822) from a racially and ethnically diverse group of individuals (over 33% of African descent) was evaluated by expert review...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6232132/ https://www.ncbi.nlm.nih.gov/pubmed/30420630 http://dx.doi.org/10.1038/s41598-018-35044-9 |
_version_ | 1783370347475632128 |
---|---|
author | Christopher, Mark Belghith, Akram Bowd, Christopher Proudfoot, James A. Goldbaum, Michael H. Weinreb, Robert N. Girkin, Christopher A. Liebmann, Jeffrey M. Zangwill, Linda M. |
author_facet | Christopher, Mark Belghith, Akram Bowd, Christopher Proudfoot, James A. Goldbaum, Michael H. Weinreb, Robert N. Girkin, Christopher A. Liebmann, Jeffrey M. Zangwill, Linda M. |
author_sort | Christopher, Mark |
collection | PubMed |
description | The ability of deep learning architectures to identify glaucomatous optic neuropathy (GON) in fundus photographs was evaluated. A large database of fundus photographs (n = 14,822) from a racially and ethnically diverse group of individuals (over 33% of African descent) was evaluated by expert reviewers and classified as GON or healthy. Several deep learning architectures and the impact of transfer learning were evaluated. The best performing model achieved an overall area under receiver operating characteristic (AUC) of 0.91 in distinguishing GON eyes from healthy eyes. It also achieved an AUC of 0.97 for identifying GON eyes with moderate-to-severe functional loss and 0.89 for GON eyes with mild functional loss. A sensitivity of 88% at a set 95% specificity was achieved in detecting moderate-to-severe GON. In all cases, transfer improved performance and reduced training time. Model visualizations indicate that these deep learning models relied on, in part, anatomical features in the inferior and superior regions of the optic disc, areas commonly used by clinicians to diagnose GON. The results suggest that deep learning-based assessment of fundus images could be useful in clinical decision support systems and in the automation of large-scale glaucoma detection and screening programs. |
format | Online Article Text |
id | pubmed-6232132 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-62321322018-11-28 Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs Christopher, Mark Belghith, Akram Bowd, Christopher Proudfoot, James A. Goldbaum, Michael H. Weinreb, Robert N. Girkin, Christopher A. Liebmann, Jeffrey M. Zangwill, Linda M. Sci Rep Article The ability of deep learning architectures to identify glaucomatous optic neuropathy (GON) in fundus photographs was evaluated. A large database of fundus photographs (n = 14,822) from a racially and ethnically diverse group of individuals (over 33% of African descent) was evaluated by expert reviewers and classified as GON or healthy. Several deep learning architectures and the impact of transfer learning were evaluated. The best performing model achieved an overall area under receiver operating characteristic (AUC) of 0.91 in distinguishing GON eyes from healthy eyes. It also achieved an AUC of 0.97 for identifying GON eyes with moderate-to-severe functional loss and 0.89 for GON eyes with mild functional loss. A sensitivity of 88% at a set 95% specificity was achieved in detecting moderate-to-severe GON. In all cases, transfer improved performance and reduced training time. Model visualizations indicate that these deep learning models relied on, in part, anatomical features in the inferior and superior regions of the optic disc, areas commonly used by clinicians to diagnose GON. The results suggest that deep learning-based assessment of fundus images could be useful in clinical decision support systems and in the automation of large-scale glaucoma detection and screening programs. Nature Publishing Group UK 2018-11-12 /pmc/articles/PMC6232132/ /pubmed/30420630 http://dx.doi.org/10.1038/s41598-018-35044-9 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Christopher, Mark Belghith, Akram Bowd, Christopher Proudfoot, James A. Goldbaum, Michael H. Weinreb, Robert N. Girkin, Christopher A. Liebmann, Jeffrey M. Zangwill, Linda M. Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs |
title | Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs |
title_full | Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs |
title_fullStr | Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs |
title_full_unstemmed | Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs |
title_short | Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs |
title_sort | performance of deep learning architectures and transfer learning for detecting glaucomatous optic neuropathy in fundus photographs |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6232132/ https://www.ncbi.nlm.nih.gov/pubmed/30420630 http://dx.doi.org/10.1038/s41598-018-35044-9 |
work_keys_str_mv | AT christophermark performanceofdeeplearningarchitecturesandtransferlearningfordetectingglaucomatousopticneuropathyinfundusphotographs AT belghithakram performanceofdeeplearningarchitecturesandtransferlearningfordetectingglaucomatousopticneuropathyinfundusphotographs AT bowdchristopher performanceofdeeplearningarchitecturesandtransferlearningfordetectingglaucomatousopticneuropathyinfundusphotographs AT proudfootjamesa performanceofdeeplearningarchitecturesandtransferlearningfordetectingglaucomatousopticneuropathyinfundusphotographs AT goldbaummichaelh performanceofdeeplearningarchitecturesandtransferlearningfordetectingglaucomatousopticneuropathyinfundusphotographs AT weinrebrobertn performanceofdeeplearningarchitecturesandtransferlearningfordetectingglaucomatousopticneuropathyinfundusphotographs AT girkinchristophera performanceofdeeplearningarchitecturesandtransferlearningfordetectingglaucomatousopticneuropathyinfundusphotographs AT liebmannjeffreym performanceofdeeplearningarchitecturesandtransferlearningfordetectingglaucomatousopticneuropathyinfundusphotographs AT zangwilllindam performanceofdeeplearningarchitecturesandtransferlearningfordetectingglaucomatousopticneuropathyinfundusphotographs |