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Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs

The ability of deep learning architectures to identify glaucomatous optic neuropathy (GON) in fundus photographs was evaluated. A large database of fundus photographs (n = 14,822) from a racially and ethnically diverse group of individuals (over 33% of African descent) was evaluated by expert review...

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Autores principales: Christopher, Mark, Belghith, Akram, Bowd, Christopher, Proudfoot, James A., Goldbaum, Michael H., Weinreb, Robert N., Girkin, Christopher A., Liebmann, Jeffrey M., Zangwill, Linda M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6232132/
https://www.ncbi.nlm.nih.gov/pubmed/30420630
http://dx.doi.org/10.1038/s41598-018-35044-9
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author Christopher, Mark
Belghith, Akram
Bowd, Christopher
Proudfoot, James A.
Goldbaum, Michael H.
Weinreb, Robert N.
Girkin, Christopher A.
Liebmann, Jeffrey M.
Zangwill, Linda M.
author_facet Christopher, Mark
Belghith, Akram
Bowd, Christopher
Proudfoot, James A.
Goldbaum, Michael H.
Weinreb, Robert N.
Girkin, Christopher A.
Liebmann, Jeffrey M.
Zangwill, Linda M.
author_sort Christopher, Mark
collection PubMed
description The ability of deep learning architectures to identify glaucomatous optic neuropathy (GON) in fundus photographs was evaluated. A large database of fundus photographs (n = 14,822) from a racially and ethnically diverse group of individuals (over 33% of African descent) was evaluated by expert reviewers and classified as GON or healthy. Several deep learning architectures and the impact of transfer learning were evaluated. The best performing model achieved an overall area under receiver operating characteristic (AUC) of 0.91 in distinguishing GON eyes from healthy eyes. It also achieved an AUC of 0.97 for identifying GON eyes with moderate-to-severe functional loss and 0.89 for GON eyes with mild functional loss. A sensitivity of 88% at a set 95% specificity was achieved in detecting moderate-to-severe GON. In all cases, transfer improved performance and reduced training time. Model visualizations indicate that these deep learning models relied on, in part, anatomical features in the inferior and superior regions of the optic disc, areas commonly used by clinicians to diagnose GON. The results suggest that deep learning-based assessment of fundus images could be useful in clinical decision support systems and in the automation of large-scale glaucoma detection and screening programs.
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spelling pubmed-62321322018-11-28 Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs Christopher, Mark Belghith, Akram Bowd, Christopher Proudfoot, James A. Goldbaum, Michael H. Weinreb, Robert N. Girkin, Christopher A. Liebmann, Jeffrey M. Zangwill, Linda M. Sci Rep Article The ability of deep learning architectures to identify glaucomatous optic neuropathy (GON) in fundus photographs was evaluated. A large database of fundus photographs (n = 14,822) from a racially and ethnically diverse group of individuals (over 33% of African descent) was evaluated by expert reviewers and classified as GON or healthy. Several deep learning architectures and the impact of transfer learning were evaluated. The best performing model achieved an overall area under receiver operating characteristic (AUC) of 0.91 in distinguishing GON eyes from healthy eyes. It also achieved an AUC of 0.97 for identifying GON eyes with moderate-to-severe functional loss and 0.89 for GON eyes with mild functional loss. A sensitivity of 88% at a set 95% specificity was achieved in detecting moderate-to-severe GON. In all cases, transfer improved performance and reduced training time. Model visualizations indicate that these deep learning models relied on, in part, anatomical features in the inferior and superior regions of the optic disc, areas commonly used by clinicians to diagnose GON. The results suggest that deep learning-based assessment of fundus images could be useful in clinical decision support systems and in the automation of large-scale glaucoma detection and screening programs. Nature Publishing Group UK 2018-11-12 /pmc/articles/PMC6232132/ /pubmed/30420630 http://dx.doi.org/10.1038/s41598-018-35044-9 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Christopher, Mark
Belghith, Akram
Bowd, Christopher
Proudfoot, James A.
Goldbaum, Michael H.
Weinreb, Robert N.
Girkin, Christopher A.
Liebmann, Jeffrey M.
Zangwill, Linda M.
Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs
title Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs
title_full Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs
title_fullStr Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs
title_full_unstemmed Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs
title_short Performance of Deep Learning Architectures and Transfer Learning for Detecting Glaucomatous Optic Neuropathy in Fundus Photographs
title_sort performance of deep learning architectures and transfer learning for detecting glaucomatous optic neuropathy in fundus photographs
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6232132/
https://www.ncbi.nlm.nih.gov/pubmed/30420630
http://dx.doi.org/10.1038/s41598-018-35044-9
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