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Automatic Human Sleep Stage Scoring Using Deep Neural Networks

The classification of sleep stages is the first and an important step in the quantitative analysis of polysomnographic recordings. Sleep stage scoring relies heavily on visual pattern recognition by a human expert and is time consuming and subjective. Thus, there is a need for automatic classificati...

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Autores principales: Malafeev, Alexander, Laptev, Dmitry, Bauer, Stefan, Omlin, Ximena, Wierzbicka, Aleksandra, Wichniak, Adam, Jernajczyk, Wojciech, Riener, Robert, Buhmann, Joachim, Achermann, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6232272/
https://www.ncbi.nlm.nih.gov/pubmed/30459544
http://dx.doi.org/10.3389/fnins.2018.00781
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author Malafeev, Alexander
Laptev, Dmitry
Bauer, Stefan
Omlin, Ximena
Wierzbicka, Aleksandra
Wichniak, Adam
Jernajczyk, Wojciech
Riener, Robert
Buhmann, Joachim
Achermann, Peter
author_facet Malafeev, Alexander
Laptev, Dmitry
Bauer, Stefan
Omlin, Ximena
Wierzbicka, Aleksandra
Wichniak, Adam
Jernajczyk, Wojciech
Riener, Robert
Buhmann, Joachim
Achermann, Peter
author_sort Malafeev, Alexander
collection PubMed
description The classification of sleep stages is the first and an important step in the quantitative analysis of polysomnographic recordings. Sleep stage scoring relies heavily on visual pattern recognition by a human expert and is time consuming and subjective. Thus, there is a need for automatic classification. In this work we developed machine learning algorithms for sleep classification: random forest (RF) classification based on features and artificial neural networks (ANNs) working both with features and raw data. We tested our methods in healthy subjects and in patients. Most algorithms yielded good results comparable to human interrater agreement. Our study revealed that deep neural networks (DNNs) working with raw data performed better than feature-based methods. We also demonstrated that taking the local temporal structure of sleep into account a priori is important. Our results demonstrate the utility of neural network architectures for the classification of sleep.
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spelling pubmed-62322722018-11-20 Automatic Human Sleep Stage Scoring Using Deep Neural Networks Malafeev, Alexander Laptev, Dmitry Bauer, Stefan Omlin, Ximena Wierzbicka, Aleksandra Wichniak, Adam Jernajczyk, Wojciech Riener, Robert Buhmann, Joachim Achermann, Peter Front Neurosci Neuroscience The classification of sleep stages is the first and an important step in the quantitative analysis of polysomnographic recordings. Sleep stage scoring relies heavily on visual pattern recognition by a human expert and is time consuming and subjective. Thus, there is a need for automatic classification. In this work we developed machine learning algorithms for sleep classification: random forest (RF) classification based on features and artificial neural networks (ANNs) working both with features and raw data. We tested our methods in healthy subjects and in patients. Most algorithms yielded good results comparable to human interrater agreement. Our study revealed that deep neural networks (DNNs) working with raw data performed better than feature-based methods. We also demonstrated that taking the local temporal structure of sleep into account a priori is important. Our results demonstrate the utility of neural network architectures for the classification of sleep. Frontiers Media S.A. 2018-11-06 /pmc/articles/PMC6232272/ /pubmed/30459544 http://dx.doi.org/10.3389/fnins.2018.00781 Text en Copyright © 2018 Malafeev, Laptev, Bauer, Omlin, Wierzbicka, Wichniak, Jernajczyk, Riener, Buhmann and Achermann. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Malafeev, Alexander
Laptev, Dmitry
Bauer, Stefan
Omlin, Ximena
Wierzbicka, Aleksandra
Wichniak, Adam
Jernajczyk, Wojciech
Riener, Robert
Buhmann, Joachim
Achermann, Peter
Automatic Human Sleep Stage Scoring Using Deep Neural Networks
title Automatic Human Sleep Stage Scoring Using Deep Neural Networks
title_full Automatic Human Sleep Stage Scoring Using Deep Neural Networks
title_fullStr Automatic Human Sleep Stage Scoring Using Deep Neural Networks
title_full_unstemmed Automatic Human Sleep Stage Scoring Using Deep Neural Networks
title_short Automatic Human Sleep Stage Scoring Using Deep Neural Networks
title_sort automatic human sleep stage scoring using deep neural networks
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6232272/
https://www.ncbi.nlm.nih.gov/pubmed/30459544
http://dx.doi.org/10.3389/fnins.2018.00781
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