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The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation

Investigations of mental illness have been enriched by the advent and maturation of neuroimaging technologies and the rapid pace and increased affordability of molecular sequencing techniques, however, the increased volume, variety and velocity of research data, presents a considerable technical and...

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Detalles Bibliográficos
Autores principales: Rotenberg, David J., Chang, Qing, Potapova, Natalia, Wang, Andy, Hon, Marcia, Sanches, Marcos, Bogetic, Nikola, Frias, Nathan, Liu, Tommy, Behan, Brendan, El-Badrawi, Rachad, Strother, Stephen C., Evans, Susan G., Mikkelsen, Jordan, Gee, Tom, Dong, Fan, Arnott, Stephen R., Laing, Shuai, Dharsee, Moyez, Vaccarino, Anthony L., Javadi, Mojib, Evans, Kenneth R., Jankowicz, Damian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6232622/
https://www.ncbi.nlm.nih.gov/pubmed/30459587
http://dx.doi.org/10.3389/fninf.2018.00077
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author Rotenberg, David J.
Chang, Qing
Potapova, Natalia
Wang, Andy
Hon, Marcia
Sanches, Marcos
Bogetic, Nikola
Frias, Nathan
Liu, Tommy
Behan, Brendan
El-Badrawi, Rachad
Strother, Stephen C.
Evans, Susan G.
Mikkelsen, Jordan
Gee, Tom
Dong, Fan
Arnott, Stephen R.
Laing, Shuai
Dharsee, Moyez
Vaccarino, Anthony L.
Javadi, Mojib
Evans, Kenneth R.
Jankowicz, Damian
author_facet Rotenberg, David J.
Chang, Qing
Potapova, Natalia
Wang, Andy
Hon, Marcia
Sanches, Marcos
Bogetic, Nikola
Frias, Nathan
Liu, Tommy
Behan, Brendan
El-Badrawi, Rachad
Strother, Stephen C.
Evans, Susan G.
Mikkelsen, Jordan
Gee, Tom
Dong, Fan
Arnott, Stephen R.
Laing, Shuai
Dharsee, Moyez
Vaccarino, Anthony L.
Javadi, Mojib
Evans, Kenneth R.
Jankowicz, Damian
author_sort Rotenberg, David J.
collection PubMed
description Investigations of mental illness have been enriched by the advent and maturation of neuroimaging technologies and the rapid pace and increased affordability of molecular sequencing techniques, however, the increased volume, variety and velocity of research data, presents a considerable technical and analytic challenge to curate, federate and interpret. Aggregation of high-dimensional datasets across brain disorders can increase sample sizes and may help identify underlying causes of brain dysfunction, however, additional barriers exist for effective data harmonization and integration for their combined use in research. To help realize the potential of multi-modal data integration for the study of mental illness, the Centre for Addiction and Mental Health (CAMH) constructed a centralized data capture, visualization and analytics environment—the CAMH Neuroinformatics Platform—based on the Ontario Brain Institute (OBI) Brain-CODE architecture, towards the curation of a standardized, consolidated psychiatric hospital-wide research dataset, directly coupled to high performance computing resources.
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spelling pubmed-62326222018-11-20 The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation Rotenberg, David J. Chang, Qing Potapova, Natalia Wang, Andy Hon, Marcia Sanches, Marcos Bogetic, Nikola Frias, Nathan Liu, Tommy Behan, Brendan El-Badrawi, Rachad Strother, Stephen C. Evans, Susan G. Mikkelsen, Jordan Gee, Tom Dong, Fan Arnott, Stephen R. Laing, Shuai Dharsee, Moyez Vaccarino, Anthony L. Javadi, Mojib Evans, Kenneth R. Jankowicz, Damian Front Neuroinform Neuroscience Investigations of mental illness have been enriched by the advent and maturation of neuroimaging technologies and the rapid pace and increased affordability of molecular sequencing techniques, however, the increased volume, variety and velocity of research data, presents a considerable technical and analytic challenge to curate, federate and interpret. Aggregation of high-dimensional datasets across brain disorders can increase sample sizes and may help identify underlying causes of brain dysfunction, however, additional barriers exist for effective data harmonization and integration for their combined use in research. To help realize the potential of multi-modal data integration for the study of mental illness, the Centre for Addiction and Mental Health (CAMH) constructed a centralized data capture, visualization and analytics environment—the CAMH Neuroinformatics Platform—based on the Ontario Brain Institute (OBI) Brain-CODE architecture, towards the curation of a standardized, consolidated psychiatric hospital-wide research dataset, directly coupled to high performance computing resources. Frontiers Media S.A. 2018-11-06 /pmc/articles/PMC6232622/ /pubmed/30459587 http://dx.doi.org/10.3389/fninf.2018.00077 Text en Copyright © 2018 Rotenberg, Chang, Potapova, Wang, Hon, Sanches, Bogetic, Frias, Liu, Behan, El-Badrawi, Strother, Evans, Mikkelsen, Gee, Dong, Arnott, Laing, Dharsee, Vaccarino, Javadi, Evans and Jankowicz. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Rotenberg, David J.
Chang, Qing
Potapova, Natalia
Wang, Andy
Hon, Marcia
Sanches, Marcos
Bogetic, Nikola
Frias, Nathan
Liu, Tommy
Behan, Brendan
El-Badrawi, Rachad
Strother, Stephen C.
Evans, Susan G.
Mikkelsen, Jordan
Gee, Tom
Dong, Fan
Arnott, Stephen R.
Laing, Shuai
Dharsee, Moyez
Vaccarino, Anthony L.
Javadi, Mojib
Evans, Kenneth R.
Jankowicz, Damian
The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation
title The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation
title_full The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation
title_fullStr The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation
title_full_unstemmed The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation
title_short The CAMH Neuroinformatics Platform: A Hospital-Focused Brain-CODE Implementation
title_sort camh neuroinformatics platform: a hospital-focused brain-code implementation
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6232622/
https://www.ncbi.nlm.nih.gov/pubmed/30459587
http://dx.doi.org/10.3389/fninf.2018.00077
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