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Exploring Coronary Artery Disease GWAs Targets With Functional Links to Immunometabolism
Finding genetic variants that cause functional disruption or regulatory change among the many implicated GWAs variants remains a key challenge to translating the findings from GWAs to therapeutic treatments. Defining the causal mechanisms behind the variants require functional screening experiments...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6232936/ https://www.ncbi.nlm.nih.gov/pubmed/30460244 http://dx.doi.org/10.3389/fcvm.2018.00148 |
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author | Hughes, Maria F. Lenighan, Yvonne M. Godson, Catherine Roche, Helen M. |
author_facet | Hughes, Maria F. Lenighan, Yvonne M. Godson, Catherine Roche, Helen M. |
author_sort | Hughes, Maria F. |
collection | PubMed |
description | Finding genetic variants that cause functional disruption or regulatory change among the many implicated GWAs variants remains a key challenge to translating the findings from GWAs to therapeutic treatments. Defining the causal mechanisms behind the variants require functional screening experiments that can be complex and costly. Prioritizing variants for functional characterization using techniques that capture important functional and regulatory elements can assist this. The genetic architecture of complex traits such as cardiovascular disease and type II diabetes comprise an enormously large number of variants of small effect contributing to heritability and spread throughout the genome. This makes it difficult to distinguish which variants or core genes are most relevant for prioritization and how they contribute to the regulatory networks that become dysregulated leading to disease. Despite these challenges, recent GWAs for CAD prioritized genes associated with lipid metabolism, coagulation and adhesion along with novel signals related to innate immunity, adipose tissue and, vascular function as important core drivers of risk. We focus on three examples of novel signals associated with CAD which affect risk through missense or UTR mutations indicating their potential for therapeutic modification. These variants play roles in adipose tissue function vascular function and innate immunity which form the cornerstones of immuno-metabolism. In addition we have explored the putative, but potentially important interactions between the environment, specifically food and nutrition, with respect to key processes. |
format | Online Article Text |
id | pubmed-6232936 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-62329362018-11-20 Exploring Coronary Artery Disease GWAs Targets With Functional Links to Immunometabolism Hughes, Maria F. Lenighan, Yvonne M. Godson, Catherine Roche, Helen M. Front Cardiovasc Med Cardiovascular Medicine Finding genetic variants that cause functional disruption or regulatory change among the many implicated GWAs variants remains a key challenge to translating the findings from GWAs to therapeutic treatments. Defining the causal mechanisms behind the variants require functional screening experiments that can be complex and costly. Prioritizing variants for functional characterization using techniques that capture important functional and regulatory elements can assist this. The genetic architecture of complex traits such as cardiovascular disease and type II diabetes comprise an enormously large number of variants of small effect contributing to heritability and spread throughout the genome. This makes it difficult to distinguish which variants or core genes are most relevant for prioritization and how they contribute to the regulatory networks that become dysregulated leading to disease. Despite these challenges, recent GWAs for CAD prioritized genes associated with lipid metabolism, coagulation and adhesion along with novel signals related to innate immunity, adipose tissue and, vascular function as important core drivers of risk. We focus on three examples of novel signals associated with CAD which affect risk through missense or UTR mutations indicating their potential for therapeutic modification. These variants play roles in adipose tissue function vascular function and innate immunity which form the cornerstones of immuno-metabolism. In addition we have explored the putative, but potentially important interactions between the environment, specifically food and nutrition, with respect to key processes. Frontiers Media S.A. 2018-11-06 /pmc/articles/PMC6232936/ /pubmed/30460244 http://dx.doi.org/10.3389/fcvm.2018.00148 Text en Copyright © 2018 Hughes, Lenighan, Godson and Roche. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cardiovascular Medicine Hughes, Maria F. Lenighan, Yvonne M. Godson, Catherine Roche, Helen M. Exploring Coronary Artery Disease GWAs Targets With Functional Links to Immunometabolism |
title | Exploring Coronary Artery Disease GWAs Targets With Functional Links to Immunometabolism |
title_full | Exploring Coronary Artery Disease GWAs Targets With Functional Links to Immunometabolism |
title_fullStr | Exploring Coronary Artery Disease GWAs Targets With Functional Links to Immunometabolism |
title_full_unstemmed | Exploring Coronary Artery Disease GWAs Targets With Functional Links to Immunometabolism |
title_short | Exploring Coronary Artery Disease GWAs Targets With Functional Links to Immunometabolism |
title_sort | exploring coronary artery disease gwas targets with functional links to immunometabolism |
topic | Cardiovascular Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6232936/ https://www.ncbi.nlm.nih.gov/pubmed/30460244 http://dx.doi.org/10.3389/fcvm.2018.00148 |
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