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Quantitative proteomic analysis of intracerebral hemorrhage in rats with a focus on brain energy metabolism
INTRODUCTION: Intracerebral hemorrhage (ICH) is a lethal cerebrovascular disorder with a high mortality and morbidity. The pathophysiological mechanisms underlying ICH‐induced secondary injury remain unclear. METHODS: To examine one of the gaps in the knowledge about ICH pathological mechanisms, iso...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6236229/ https://www.ncbi.nlm.nih.gov/pubmed/30307711 http://dx.doi.org/10.1002/brb3.1130 |
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author | Liu, Tao Zhou, Jing Cui, Hanjin Li, Pengfei Li, Haigang Wang, Yang Tang, Tao |
author_facet | Liu, Tao Zhou, Jing Cui, Hanjin Li, Pengfei Li, Haigang Wang, Yang Tang, Tao |
author_sort | Liu, Tao |
collection | PubMed |
description | INTRODUCTION: Intracerebral hemorrhage (ICH) is a lethal cerebrovascular disorder with a high mortality and morbidity. The pathophysiological mechanisms underlying ICH‐induced secondary injury remain unclear. METHODS: To examine one of the gaps in the knowledge about ICH pathological mechanisms, isobaric tag for relative and absolute quantification (iTRAQ)‐based liquid chromatography‐tandem mass spectrometry (LC‐MS/MS) was used in collagenase‐induced ICH rats on the 2nd day. RESULTS: A total of 6,456 proteins were identified with a 1% false discovery rate (FDR). Of these proteins, 126 and 75 differentially expressed proteins (DEPs) were substantially increased and decreased, respectively. Based on Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and STRING analyses, the protein changes in cerebral hemorrhage were comprehensively evaluated, and the energy metabolism in ICH was anchored. The core position of the nitrogen metabolism pathway in brain metabolism in ICH was found for the first time. Carbonic anhydrase 1 (Ca1), carbonic anhydrase 2 (Ca2), and glutamine synthetase (Glul) participated in this pathway. We constructed the protein–protein interaction (PPI) networks for the energy metabolism of ICH, including the Atp6v1a‐Atp6v0c‐Atp6v0d1‐Ppa2‐Atp6ap2 network. CONCLUSIONS: It seems that dysregulation of energy metabolism, especially nitrogen metabolism, may be a major cause in secondary ICH injury. This information provides novel insights into secondary events following ICH. |
format | Online Article Text |
id | pubmed-6236229 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-62362292018-11-20 Quantitative proteomic analysis of intracerebral hemorrhage in rats with a focus on brain energy metabolism Liu, Tao Zhou, Jing Cui, Hanjin Li, Pengfei Li, Haigang Wang, Yang Tang, Tao Brain Behav Original Research INTRODUCTION: Intracerebral hemorrhage (ICH) is a lethal cerebrovascular disorder with a high mortality and morbidity. The pathophysiological mechanisms underlying ICH‐induced secondary injury remain unclear. METHODS: To examine one of the gaps in the knowledge about ICH pathological mechanisms, isobaric tag for relative and absolute quantification (iTRAQ)‐based liquid chromatography‐tandem mass spectrometry (LC‐MS/MS) was used in collagenase‐induced ICH rats on the 2nd day. RESULTS: A total of 6,456 proteins were identified with a 1% false discovery rate (FDR). Of these proteins, 126 and 75 differentially expressed proteins (DEPs) were substantially increased and decreased, respectively. Based on Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and STRING analyses, the protein changes in cerebral hemorrhage were comprehensively evaluated, and the energy metabolism in ICH was anchored. The core position of the nitrogen metabolism pathway in brain metabolism in ICH was found for the first time. Carbonic anhydrase 1 (Ca1), carbonic anhydrase 2 (Ca2), and glutamine synthetase (Glul) participated in this pathway. We constructed the protein–protein interaction (PPI) networks for the energy metabolism of ICH, including the Atp6v1a‐Atp6v0c‐Atp6v0d1‐Ppa2‐Atp6ap2 network. CONCLUSIONS: It seems that dysregulation of energy metabolism, especially nitrogen metabolism, may be a major cause in secondary ICH injury. This information provides novel insights into secondary events following ICH. John Wiley and Sons Inc. 2018-10-11 /pmc/articles/PMC6236229/ /pubmed/30307711 http://dx.doi.org/10.1002/brb3.1130 Text en © 2018 The Authors. Brain and Behavior published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Liu, Tao Zhou, Jing Cui, Hanjin Li, Pengfei Li, Haigang Wang, Yang Tang, Tao Quantitative proteomic analysis of intracerebral hemorrhage in rats with a focus on brain energy metabolism |
title | Quantitative proteomic analysis of intracerebral hemorrhage in rats with a focus on brain energy metabolism |
title_full | Quantitative proteomic analysis of intracerebral hemorrhage in rats with a focus on brain energy metabolism |
title_fullStr | Quantitative proteomic analysis of intracerebral hemorrhage in rats with a focus on brain energy metabolism |
title_full_unstemmed | Quantitative proteomic analysis of intracerebral hemorrhage in rats with a focus on brain energy metabolism |
title_short | Quantitative proteomic analysis of intracerebral hemorrhage in rats with a focus on brain energy metabolism |
title_sort | quantitative proteomic analysis of intracerebral hemorrhage in rats with a focus on brain energy metabolism |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6236229/ https://www.ncbi.nlm.nih.gov/pubmed/30307711 http://dx.doi.org/10.1002/brb3.1130 |
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