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Exploring the Sulfatase 1 Catch Bond Free Energy Landscape using Jarzynski’s Equality
In non-covalent biological adhesion, molecular bonds commonly exhibit a monotonously decreasing life time when subjected to tensile forces (slip bonds). In contrast, catch bonds behave counter intuitively, as they show an increased life time within a certain force interval. To date only a hand full...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6237999/ https://www.ncbi.nlm.nih.gov/pubmed/30442949 http://dx.doi.org/10.1038/s41598-018-35120-0 |
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author | Walhorn, Volker Möller, Ann-Kristin Bartz, Christian Dierks, Thomas Anselmetti, Dario |
author_facet | Walhorn, Volker Möller, Ann-Kristin Bartz, Christian Dierks, Thomas Anselmetti, Dario |
author_sort | Walhorn, Volker |
collection | PubMed |
description | In non-covalent biological adhesion, molecular bonds commonly exhibit a monotonously decreasing life time when subjected to tensile forces (slip bonds). In contrast, catch bonds behave counter intuitively, as they show an increased life time within a certain force interval. To date only a hand full of catch bond displaying systems have been identified. In order to unveil their nature, a number of structural and phenomenological models have been introduced. Regardless of the individual causes for catch bond behavior, it appears evident that the free energy landscapes of these interactions bear more than one binding state. Here, we investigated the catch bond interaction between the hydrophilic domain of the human cell surface sulfatase 1 (Sulf1HD) and its physiological substrate heparan sulfate (HS) by atomic force microscopy based single molecule force spectroscopy (AFM-SMFS). Using Jarzynski’s equality, we estimated the associated Gibbs free energy and provide a comprehensive thermodynamic and kinetic characterization of Sulf1HD/HS interaction. Interestingly, the binding potential landscape exhibits two distinct potential wells which confirms the recently suggested two state binding. Even though structural data of Sulf1HD is lacking, our results allow to draft a detailed picture of the directed and processive desulfation of HS. |
format | Online Article Text |
id | pubmed-6237999 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-62379992018-11-23 Exploring the Sulfatase 1 Catch Bond Free Energy Landscape using Jarzynski’s Equality Walhorn, Volker Möller, Ann-Kristin Bartz, Christian Dierks, Thomas Anselmetti, Dario Sci Rep Article In non-covalent biological adhesion, molecular bonds commonly exhibit a monotonously decreasing life time when subjected to tensile forces (slip bonds). In contrast, catch bonds behave counter intuitively, as they show an increased life time within a certain force interval. To date only a hand full of catch bond displaying systems have been identified. In order to unveil their nature, a number of structural and phenomenological models have been introduced. Regardless of the individual causes for catch bond behavior, it appears evident that the free energy landscapes of these interactions bear more than one binding state. Here, we investigated the catch bond interaction between the hydrophilic domain of the human cell surface sulfatase 1 (Sulf1HD) and its physiological substrate heparan sulfate (HS) by atomic force microscopy based single molecule force spectroscopy (AFM-SMFS). Using Jarzynski’s equality, we estimated the associated Gibbs free energy and provide a comprehensive thermodynamic and kinetic characterization of Sulf1HD/HS interaction. Interestingly, the binding potential landscape exhibits two distinct potential wells which confirms the recently suggested two state binding. Even though structural data of Sulf1HD is lacking, our results allow to draft a detailed picture of the directed and processive desulfation of HS. Nature Publishing Group UK 2018-11-15 /pmc/articles/PMC6237999/ /pubmed/30442949 http://dx.doi.org/10.1038/s41598-018-35120-0 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Walhorn, Volker Möller, Ann-Kristin Bartz, Christian Dierks, Thomas Anselmetti, Dario Exploring the Sulfatase 1 Catch Bond Free Energy Landscape using Jarzynski’s Equality |
title | Exploring the Sulfatase 1 Catch Bond Free Energy Landscape using Jarzynski’s Equality |
title_full | Exploring the Sulfatase 1 Catch Bond Free Energy Landscape using Jarzynski’s Equality |
title_fullStr | Exploring the Sulfatase 1 Catch Bond Free Energy Landscape using Jarzynski’s Equality |
title_full_unstemmed | Exploring the Sulfatase 1 Catch Bond Free Energy Landscape using Jarzynski’s Equality |
title_short | Exploring the Sulfatase 1 Catch Bond Free Energy Landscape using Jarzynski’s Equality |
title_sort | exploring the sulfatase 1 catch bond free energy landscape using jarzynski’s equality |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6237999/ https://www.ncbi.nlm.nih.gov/pubmed/30442949 http://dx.doi.org/10.1038/s41598-018-35120-0 |
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