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Optimal intensive care outcome prediction over time using machine learning

BACKGROUND: Prognostication is an essential tool for risk adjustment and decision making in the intensive care unit (ICU). Research into prognostication in ICU has so far been limited to data from admission or the first 24 hours. Most ICU admissions last longer than this, decisions are made througho...

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Autores principales: Meiring, Christopher, Dixit, Abhishek, Harris, Steve, MacCallum, Niall S., Brealey, David A., Watkinson, Peter J., Jones, Andrew, Ashworth, Simon, Beale, Richard, Brett, Stephen J., Singer, Mervyn, Ercole, Ari
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6241126/
https://www.ncbi.nlm.nih.gov/pubmed/30427913
http://dx.doi.org/10.1371/journal.pone.0206862
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author Meiring, Christopher
Dixit, Abhishek
Harris, Steve
MacCallum, Niall S.
Brealey, David A.
Watkinson, Peter J.
Jones, Andrew
Ashworth, Simon
Beale, Richard
Brett, Stephen J.
Singer, Mervyn
Ercole, Ari
author_facet Meiring, Christopher
Dixit, Abhishek
Harris, Steve
MacCallum, Niall S.
Brealey, David A.
Watkinson, Peter J.
Jones, Andrew
Ashworth, Simon
Beale, Richard
Brett, Stephen J.
Singer, Mervyn
Ercole, Ari
author_sort Meiring, Christopher
collection PubMed
description BACKGROUND: Prognostication is an essential tool for risk adjustment and decision making in the intensive care unit (ICU). Research into prognostication in ICU has so far been limited to data from admission or the first 24 hours. Most ICU admissions last longer than this, decisions are made throughout an admission, and some admissions are explicitly intended as time-limited prognostic trials. Despite this, temporal changes in prognostic ability during ICU admission has received little attention to date. Current predictive models, in the form of prognostic clinical tools, are typically derived from linear models and do not explicitly handle incremental information from trends. Machine learning (ML) allows predictive models to be developed which use non-linear predictors and complex interactions between variables, thus allowing incorporation of trends in measured variables over time; this has made it possible to investigate prognosis throughout an admission. METHODS AND FINDINGS: This study uses ML to assess the predictability of ICU mortality as a function of time. Logistic regression against physiological data alone outperformed APACHE-II and demonstrated several important interactions including between lactate & noradrenaline dose, between lactate & MAP, and between age & MAP consistent with the current sepsis definitions. ML models consistently outperformed logistic regression with Deep Learning giving the best results. Predictive power was maximal on the second day and was further improved by incorporating trend data. Using a limited range of physiological and demographic variables, the best machine learning model on the first day showed an area under the receiver-operator characteristic curve (AUC) of 0.883 (σ = 0.008), compared to 0.846 (σ = 0.010) for a logistic regression from the same predictors and 0.836 (σ = 0.007) for a logistic regression based on the APACHE-II score. Adding information gathered on the second day of admission improved the maximum AUC to 0.895 (σ = 0.008). Beyond the second day, predictive ability declined. CONCLUSION: This has implications for decision making in intensive care and provides a justification for time-limited trials of ICU therapy; the assessment of prognosis over more than one day may be a valuable strategy as new information on the second day helps to differentiate outcomes. New ML models based on trend data beyond the first day could greatly improve upon current risk stratification tools.
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spelling pubmed-62411262018-12-01 Optimal intensive care outcome prediction over time using machine learning Meiring, Christopher Dixit, Abhishek Harris, Steve MacCallum, Niall S. Brealey, David A. Watkinson, Peter J. Jones, Andrew Ashworth, Simon Beale, Richard Brett, Stephen J. Singer, Mervyn Ercole, Ari PLoS One Research Article BACKGROUND: Prognostication is an essential tool for risk adjustment and decision making in the intensive care unit (ICU). Research into prognostication in ICU has so far been limited to data from admission or the first 24 hours. Most ICU admissions last longer than this, decisions are made throughout an admission, and some admissions are explicitly intended as time-limited prognostic trials. Despite this, temporal changes in prognostic ability during ICU admission has received little attention to date. Current predictive models, in the form of prognostic clinical tools, are typically derived from linear models and do not explicitly handle incremental information from trends. Machine learning (ML) allows predictive models to be developed which use non-linear predictors and complex interactions between variables, thus allowing incorporation of trends in measured variables over time; this has made it possible to investigate prognosis throughout an admission. METHODS AND FINDINGS: This study uses ML to assess the predictability of ICU mortality as a function of time. Logistic regression against physiological data alone outperformed APACHE-II and demonstrated several important interactions including between lactate & noradrenaline dose, between lactate & MAP, and between age & MAP consistent with the current sepsis definitions. ML models consistently outperformed logistic regression with Deep Learning giving the best results. Predictive power was maximal on the second day and was further improved by incorporating trend data. Using a limited range of physiological and demographic variables, the best machine learning model on the first day showed an area under the receiver-operator characteristic curve (AUC) of 0.883 (σ = 0.008), compared to 0.846 (σ = 0.010) for a logistic regression from the same predictors and 0.836 (σ = 0.007) for a logistic regression based on the APACHE-II score. Adding information gathered on the second day of admission improved the maximum AUC to 0.895 (σ = 0.008). Beyond the second day, predictive ability declined. CONCLUSION: This has implications for decision making in intensive care and provides a justification for time-limited trials of ICU therapy; the assessment of prognosis over more than one day may be a valuable strategy as new information on the second day helps to differentiate outcomes. New ML models based on trend data beyond the first day could greatly improve upon current risk stratification tools. Public Library of Science 2018-11-14 /pmc/articles/PMC6241126/ /pubmed/30427913 http://dx.doi.org/10.1371/journal.pone.0206862 Text en © 2018 Meiring et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Meiring, Christopher
Dixit, Abhishek
Harris, Steve
MacCallum, Niall S.
Brealey, David A.
Watkinson, Peter J.
Jones, Andrew
Ashworth, Simon
Beale, Richard
Brett, Stephen J.
Singer, Mervyn
Ercole, Ari
Optimal intensive care outcome prediction over time using machine learning
title Optimal intensive care outcome prediction over time using machine learning
title_full Optimal intensive care outcome prediction over time using machine learning
title_fullStr Optimal intensive care outcome prediction over time using machine learning
title_full_unstemmed Optimal intensive care outcome prediction over time using machine learning
title_short Optimal intensive care outcome prediction over time using machine learning
title_sort optimal intensive care outcome prediction over time using machine learning
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6241126/
https://www.ncbi.nlm.nih.gov/pubmed/30427913
http://dx.doi.org/10.1371/journal.pone.0206862
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