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Ab initio structure determination from experimental fluctuation X-ray scattering data
Fluctuation X-ray scattering (FXS) is an emerging experimental technique in which X-ray solution scattering data are collected from particles in solution using ultrashort X-ray exposures generated by a free-electron laser (FEL). FXS experiments overcome the low data-to-parameter ratios associated wi...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
National Academy of Sciences
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6243272/ https://www.ncbi.nlm.nih.gov/pubmed/30373827 http://dx.doi.org/10.1073/pnas.1812064115 |
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author | Pande, Kanupriya Donatelli, Jeffrey J. Malmerberg, Erik Foucar, Lutz Bostedt, Christoph Schlichting, Ilme Zwart, Petrus H. |
author_facet | Pande, Kanupriya Donatelli, Jeffrey J. Malmerberg, Erik Foucar, Lutz Bostedt, Christoph Schlichting, Ilme Zwart, Petrus H. |
author_sort | Pande, Kanupriya |
collection | PubMed |
description | Fluctuation X-ray scattering (FXS) is an emerging experimental technique in which X-ray solution scattering data are collected from particles in solution using ultrashort X-ray exposures generated by a free-electron laser (FEL). FXS experiments overcome the low data-to-parameter ratios associated with traditional solution scattering measurements by providing several orders of magnitude more information in the final processed data. Here we demonstrate the practical feasibility of FEL-based FXS on a biological multiple-particle system and describe data-processing techniques required to extract robust FXS data and significantly reduce the required number of snapshots needed by introducing an iterative noise-filtering technique. We showcase a successful ab initio electron density reconstruction from such an experiment, studying the Paramecium bursaria Chlorella virus (PBCV-1). |
format | Online Article Text |
id | pubmed-6243272 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | National Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-62432722018-11-27 Ab initio structure determination from experimental fluctuation X-ray scattering data Pande, Kanupriya Donatelli, Jeffrey J. Malmerberg, Erik Foucar, Lutz Bostedt, Christoph Schlichting, Ilme Zwart, Petrus H. Proc Natl Acad Sci U S A Biological Sciences Fluctuation X-ray scattering (FXS) is an emerging experimental technique in which X-ray solution scattering data are collected from particles in solution using ultrashort X-ray exposures generated by a free-electron laser (FEL). FXS experiments overcome the low data-to-parameter ratios associated with traditional solution scattering measurements by providing several orders of magnitude more information in the final processed data. Here we demonstrate the practical feasibility of FEL-based FXS on a biological multiple-particle system and describe data-processing techniques required to extract robust FXS data and significantly reduce the required number of snapshots needed by introducing an iterative noise-filtering technique. We showcase a successful ab initio electron density reconstruction from such an experiment, studying the Paramecium bursaria Chlorella virus (PBCV-1). National Academy of Sciences 2018-11-13 2018-10-29 /pmc/articles/PMC6243272/ /pubmed/30373827 http://dx.doi.org/10.1073/pnas.1812064115 Text en Copyright © 2018 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/ This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Biological Sciences Pande, Kanupriya Donatelli, Jeffrey J. Malmerberg, Erik Foucar, Lutz Bostedt, Christoph Schlichting, Ilme Zwart, Petrus H. Ab initio structure determination from experimental fluctuation X-ray scattering data |
title | Ab initio structure determination from experimental fluctuation X-ray scattering data |
title_full | Ab initio structure determination from experimental fluctuation X-ray scattering data |
title_fullStr | Ab initio structure determination from experimental fluctuation X-ray scattering data |
title_full_unstemmed | Ab initio structure determination from experimental fluctuation X-ray scattering data |
title_short | Ab initio structure determination from experimental fluctuation X-ray scattering data |
title_sort | ab initio structure determination from experimental fluctuation x-ray scattering data |
topic | Biological Sciences |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6243272/ https://www.ncbi.nlm.nih.gov/pubmed/30373827 http://dx.doi.org/10.1073/pnas.1812064115 |
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