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Classifying development stages of primeval European beech forests: is clustering a useful tool?

BACKGROUND: Old-growth and primeval forests are passing through a natural development cycle with recurring stages of forest development. Several methods for assigning patches of different structure and size to forest development stages or phases do exist. All currently existing classification method...

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Autores principales: Glatthorn, Jonas, Feldmann, Eike, Tabaku, Vath, Leuschner, Christoph, Meyer, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247681/
https://www.ncbi.nlm.nih.gov/pubmed/30458749
http://dx.doi.org/10.1186/s12898-018-0203-y
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author Glatthorn, Jonas
Feldmann, Eike
Tabaku, Vath
Leuschner, Christoph
Meyer, Peter
author_facet Glatthorn, Jonas
Feldmann, Eike
Tabaku, Vath
Leuschner, Christoph
Meyer, Peter
author_sort Glatthorn, Jonas
collection PubMed
description BACKGROUND: Old-growth and primeval forests are passing through a natural development cycle with recurring stages of forest development. Several methods for assigning patches of different structure and size to forest development stages or phases do exist. All currently existing classification methods have in common that a priori assumptions about the characteristics of certain stand structural attributes such as deadwood amount are made. We tested the hypothesis that multivariate datasets of primeval beech forest stand structure possess an inherent, aggregated configuration of data points with individual clusters representing forest development stages. From two completely mapped primeval beech forests in Albania, seven ecologically important stand structural attributes characterizing stand density, regeneration, stem diameter variation and amount of deadwood are derived at 8216 and 9666 virtual sampling points (moving window, focal filtering). K-means clustering is used to detect clusters in the datasets (number of clusters (k) between 2 and 5). The quality of the single clustering solutions is analyzed with average silhouette width as a measure for clustering quality. In a sensitivity analysis, clustering is done with datasets of four different spatial scales of observation (200, 500, 1000 and 1500 m(2), circular virtual plot area around sampling points) and with two different kernels (equal weighting of all objects within a plot vs. weighting by distance to the virtual plot center). RESULTS: The clustering solutions succeeded in detecting and mapping areas with homogeneous stand structure. The areas had extensions of more than 200 m(2), but differences between clusters were very small with average silhouette widths of less than 0.28. The obtained datasets had a homogeneous configuration with only very weak trends for clustering. CONCLUSIONS: Our results imply that forest development takes place on a continuous scale and that discrimination between development stages in primeval beech forests is splitting continuous datasets at selected thresholds. For the analysis of the forest development cycle, direct quantification of relevant structural features or processes might be more appropriate than classification. If, however, the study design demands classification, our results can justify the application of conventional forest development stage classification schemes rather than clustering. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12898-018-0203-y) contains supplementary material, which is available to authorized users.
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spelling pubmed-62476812018-11-26 Classifying development stages of primeval European beech forests: is clustering a useful tool? Glatthorn, Jonas Feldmann, Eike Tabaku, Vath Leuschner, Christoph Meyer, Peter BMC Ecol Research Article BACKGROUND: Old-growth and primeval forests are passing through a natural development cycle with recurring stages of forest development. Several methods for assigning patches of different structure and size to forest development stages or phases do exist. All currently existing classification methods have in common that a priori assumptions about the characteristics of certain stand structural attributes such as deadwood amount are made. We tested the hypothesis that multivariate datasets of primeval beech forest stand structure possess an inherent, aggregated configuration of data points with individual clusters representing forest development stages. From two completely mapped primeval beech forests in Albania, seven ecologically important stand structural attributes characterizing stand density, regeneration, stem diameter variation and amount of deadwood are derived at 8216 and 9666 virtual sampling points (moving window, focal filtering). K-means clustering is used to detect clusters in the datasets (number of clusters (k) between 2 and 5). The quality of the single clustering solutions is analyzed with average silhouette width as a measure for clustering quality. In a sensitivity analysis, clustering is done with datasets of four different spatial scales of observation (200, 500, 1000 and 1500 m(2), circular virtual plot area around sampling points) and with two different kernels (equal weighting of all objects within a plot vs. weighting by distance to the virtual plot center). RESULTS: The clustering solutions succeeded in detecting and mapping areas with homogeneous stand structure. The areas had extensions of more than 200 m(2), but differences between clusters were very small with average silhouette widths of less than 0.28. The obtained datasets had a homogeneous configuration with only very weak trends for clustering. CONCLUSIONS: Our results imply that forest development takes place on a continuous scale and that discrimination between development stages in primeval beech forests is splitting continuous datasets at selected thresholds. For the analysis of the forest development cycle, direct quantification of relevant structural features or processes might be more appropriate than classification. If, however, the study design demands classification, our results can justify the application of conventional forest development stage classification schemes rather than clustering. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12898-018-0203-y) contains supplementary material, which is available to authorized users. BioMed Central 2018-11-20 /pmc/articles/PMC6247681/ /pubmed/30458749 http://dx.doi.org/10.1186/s12898-018-0203-y Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Glatthorn, Jonas
Feldmann, Eike
Tabaku, Vath
Leuschner, Christoph
Meyer, Peter
Classifying development stages of primeval European beech forests: is clustering a useful tool?
title Classifying development stages of primeval European beech forests: is clustering a useful tool?
title_full Classifying development stages of primeval European beech forests: is clustering a useful tool?
title_fullStr Classifying development stages of primeval European beech forests: is clustering a useful tool?
title_full_unstemmed Classifying development stages of primeval European beech forests: is clustering a useful tool?
title_short Classifying development stages of primeval European beech forests: is clustering a useful tool?
title_sort classifying development stages of primeval european beech forests: is clustering a useful tool?
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247681/
https://www.ncbi.nlm.nih.gov/pubmed/30458749
http://dx.doi.org/10.1186/s12898-018-0203-y
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