ASGAL: aligning RNA-Seq data to a splicing graph to detect novel alternative splicing events

BACKGROUND: While the reconstruction of transcripts from a sample of RNA-Seq data is a computationally expensive and complicated task, the detection of splicing events from RNA-Seq data and a gene annotation is computationally feasible. This latter task, which is adequate for many transcriptome anal...

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Detalles Bibliográficos
Autores principales: Denti, Luca, Rizzi, Raffaella, Beretta, Stefano, Vedova, Gianluca Della, Previtali, Marco, Bonizzoni, Paola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247705/
https://www.ncbi.nlm.nih.gov/pubmed/30458725
http://dx.doi.org/10.1186/s12859-018-2436-3

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