Cargando…
Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury
Acute Kidney Injury (AKI) is a common complication encountered among hospitalized patients, imposing significantly increased cost, morbidity, and mortality. Early prediction of AKI has profound clinical implications because currently no treatment exists for AKI once it develops. Feature selection (F...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6251919/ https://www.ncbi.nlm.nih.gov/pubmed/30470779 http://dx.doi.org/10.1038/s41598-018-35487-0 |
_version_ | 1783373174238347264 |
---|---|
author | Wu, Lijuan Hu, Yong Liu, Xiaoxiao Zhang, Xiangzhou Chen, Weiqi Yu, Alan S. L. Kellum, John A. Waitman, Lemuel R. Liu, Mei |
author_facet | Wu, Lijuan Hu, Yong Liu, Xiaoxiao Zhang, Xiangzhou Chen, Weiqi Yu, Alan S. L. Kellum, John A. Waitman, Lemuel R. Liu, Mei |
author_sort | Wu, Lijuan |
collection | PubMed |
description | Acute Kidney Injury (AKI) is a common complication encountered among hospitalized patients, imposing significantly increased cost, morbidity, and mortality. Early prediction of AKI has profound clinical implications because currently no treatment exists for AKI once it develops. Feature selection (FS) is an essential process for building accurate and interpretable prediction models, but to our best knowledge no study has investigated the robustness and applicability of such selection process for AKI. In this study, we compared eight widely-applied FS methods for AKI prediction using nine-years of electronic medical records (EMR) and examined heterogeneity in feature rankings produced by the methods. FS methods were compared in terms of stability with respect to data sampling variation, similarity between selection results, and AKI prediction performance. Prediction accuracy did not intrinsically guarantee the feature ranking stability. Across different FS methods, the prediction performance did not change significantly, while the importance rankings of features were quite different. A positive correlation was observed between the complexity of suitable FS method and sample size. This study provides several practical implications, including recognizing the importance of feature stability as it is desirable for model reproducibility, identifying important AKI risk factors for further investigation, and facilitating early prediction of AKI. |
format | Online Article Text |
id | pubmed-6251919 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-62519192018-11-30 Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury Wu, Lijuan Hu, Yong Liu, Xiaoxiao Zhang, Xiangzhou Chen, Weiqi Yu, Alan S. L. Kellum, John A. Waitman, Lemuel R. Liu, Mei Sci Rep Article Acute Kidney Injury (AKI) is a common complication encountered among hospitalized patients, imposing significantly increased cost, morbidity, and mortality. Early prediction of AKI has profound clinical implications because currently no treatment exists for AKI once it develops. Feature selection (FS) is an essential process for building accurate and interpretable prediction models, but to our best knowledge no study has investigated the robustness and applicability of such selection process for AKI. In this study, we compared eight widely-applied FS methods for AKI prediction using nine-years of electronic medical records (EMR) and examined heterogeneity in feature rankings produced by the methods. FS methods were compared in terms of stability with respect to data sampling variation, similarity between selection results, and AKI prediction performance. Prediction accuracy did not intrinsically guarantee the feature ranking stability. Across different FS methods, the prediction performance did not change significantly, while the importance rankings of features were quite different. A positive correlation was observed between the complexity of suitable FS method and sample size. This study provides several practical implications, including recognizing the importance of feature stability as it is desirable for model reproducibility, identifying important AKI risk factors for further investigation, and facilitating early prediction of AKI. Nature Publishing Group UK 2018-11-23 /pmc/articles/PMC6251919/ /pubmed/30470779 http://dx.doi.org/10.1038/s41598-018-35487-0 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Wu, Lijuan Hu, Yong Liu, Xiaoxiao Zhang, Xiangzhou Chen, Weiqi Yu, Alan S. L. Kellum, John A. Waitman, Lemuel R. Liu, Mei Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury |
title | Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury |
title_full | Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury |
title_fullStr | Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury |
title_full_unstemmed | Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury |
title_short | Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury |
title_sort | feature ranking in predictive models for hospital-acquired acute kidney injury |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6251919/ https://www.ncbi.nlm.nih.gov/pubmed/30470779 http://dx.doi.org/10.1038/s41598-018-35487-0 |
work_keys_str_mv | AT wulijuan featurerankinginpredictivemodelsforhospitalacquiredacutekidneyinjury AT huyong featurerankinginpredictivemodelsforhospitalacquiredacutekidneyinjury AT liuxiaoxiao featurerankinginpredictivemodelsforhospitalacquiredacutekidneyinjury AT zhangxiangzhou featurerankinginpredictivemodelsforhospitalacquiredacutekidneyinjury AT chenweiqi featurerankinginpredictivemodelsforhospitalacquiredacutekidneyinjury AT yualansl featurerankinginpredictivemodelsforhospitalacquiredacutekidneyinjury AT kellumjohna featurerankinginpredictivemodelsforhospitalacquiredacutekidneyinjury AT waitmanlemuelr featurerankinginpredictivemodelsforhospitalacquiredacutekidneyinjury AT liumei featurerankinginpredictivemodelsforhospitalacquiredacutekidneyinjury |