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Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury

Acute Kidney Injury (AKI) is a common complication encountered among hospitalized patients, imposing significantly increased cost, morbidity, and mortality. Early prediction of AKI has profound clinical implications because currently no treatment exists for AKI once it develops. Feature selection (F...

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Detalles Bibliográficos
Autores principales: Wu, Lijuan, Hu, Yong, Liu, Xiaoxiao, Zhang, Xiangzhou, Chen, Weiqi, Yu, Alan S. L., Kellum, John A., Waitman, Lemuel R., Liu, Mei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6251919/
https://www.ncbi.nlm.nih.gov/pubmed/30470779
http://dx.doi.org/10.1038/s41598-018-35487-0
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author Wu, Lijuan
Hu, Yong
Liu, Xiaoxiao
Zhang, Xiangzhou
Chen, Weiqi
Yu, Alan S. L.
Kellum, John A.
Waitman, Lemuel R.
Liu, Mei
author_facet Wu, Lijuan
Hu, Yong
Liu, Xiaoxiao
Zhang, Xiangzhou
Chen, Weiqi
Yu, Alan S. L.
Kellum, John A.
Waitman, Lemuel R.
Liu, Mei
author_sort Wu, Lijuan
collection PubMed
description Acute Kidney Injury (AKI) is a common complication encountered among hospitalized patients, imposing significantly increased cost, morbidity, and mortality. Early prediction of AKI has profound clinical implications because currently no treatment exists for AKI once it develops. Feature selection (FS) is an essential process for building accurate and interpretable prediction models, but to our best knowledge no study has investigated the robustness and applicability of such selection process for AKI. In this study, we compared eight widely-applied FS methods for AKI prediction using nine-years of electronic medical records (EMR) and examined heterogeneity in feature rankings produced by the methods. FS methods were compared in terms of stability with respect to data sampling variation, similarity between selection results, and AKI prediction performance. Prediction accuracy did not intrinsically guarantee the feature ranking stability. Across different FS methods, the prediction performance did not change significantly, while the importance rankings of features were quite different. A positive correlation was observed between the complexity of suitable FS method and sample size. This study provides several practical implications, including recognizing the importance of feature stability as it is desirable for model reproducibility, identifying important AKI risk factors for further investigation, and facilitating early prediction of AKI.
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spelling pubmed-62519192018-11-30 Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury Wu, Lijuan Hu, Yong Liu, Xiaoxiao Zhang, Xiangzhou Chen, Weiqi Yu, Alan S. L. Kellum, John A. Waitman, Lemuel R. Liu, Mei Sci Rep Article Acute Kidney Injury (AKI) is a common complication encountered among hospitalized patients, imposing significantly increased cost, morbidity, and mortality. Early prediction of AKI has profound clinical implications because currently no treatment exists for AKI once it develops. Feature selection (FS) is an essential process for building accurate and interpretable prediction models, but to our best knowledge no study has investigated the robustness and applicability of such selection process for AKI. In this study, we compared eight widely-applied FS methods for AKI prediction using nine-years of electronic medical records (EMR) and examined heterogeneity in feature rankings produced by the methods. FS methods were compared in terms of stability with respect to data sampling variation, similarity between selection results, and AKI prediction performance. Prediction accuracy did not intrinsically guarantee the feature ranking stability. Across different FS methods, the prediction performance did not change significantly, while the importance rankings of features were quite different. A positive correlation was observed between the complexity of suitable FS method and sample size. This study provides several practical implications, including recognizing the importance of feature stability as it is desirable for model reproducibility, identifying important AKI risk factors for further investigation, and facilitating early prediction of AKI. Nature Publishing Group UK 2018-11-23 /pmc/articles/PMC6251919/ /pubmed/30470779 http://dx.doi.org/10.1038/s41598-018-35487-0 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Wu, Lijuan
Hu, Yong
Liu, Xiaoxiao
Zhang, Xiangzhou
Chen, Weiqi
Yu, Alan S. L.
Kellum, John A.
Waitman, Lemuel R.
Liu, Mei
Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury
title Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury
title_full Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury
title_fullStr Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury
title_full_unstemmed Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury
title_short Feature Ranking in Predictive Models for Hospital-Acquired Acute Kidney Injury
title_sort feature ranking in predictive models for hospital-acquired acute kidney injury
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6251919/
https://www.ncbi.nlm.nih.gov/pubmed/30470779
http://dx.doi.org/10.1038/s41598-018-35487-0
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