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498. Molecular Epidemiology of C. difficile Within a Community Hospital: A Pilot for a Regional Survey
BACKGROUND: Clostridium difficile is the leading cause of healthcare-associated infection. As incidence rises, its epidemiology is also evolving. 20–50% of cases are now community-acquired; C. difficile cases arise from more diverse sources than previously thought. In this study, we investigated the...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6253701/ http://dx.doi.org/10.1093/ofid/ofy210.507 |
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author | Turner, Nicholas Warren, Bobby Fowler, Vance G Anderson, Deverick J |
author_facet | Turner, Nicholas Warren, Bobby Fowler, Vance G Anderson, Deverick J |
author_sort | Turner, Nicholas |
collection | PubMed |
description | BACKGROUND: Clostridium difficile is the leading cause of healthcare-associated infection. As incidence rises, its epidemiology is also evolving. 20–50% of cases are now community-acquired; C. difficile cases arise from more diverse sources than previously thought. In this study, we investigated the diversity of C. difficile within a community hospital. METHODS: Stool samples were collected from symptomatic adults with a positive C. difficile PCR admitted to Duke Regional Hospital from July 2016 to July 2017. Healthcare-associated CDI was defined by any admission to a hospital, nursing or dialysis facility in the preceding 30 days. C. difficile was isolated by ethanol shock followed by plating on CDSA media. DNA was extracted using a chelex-based protocol. PCR ribotyping was conducted using the Bidet primers and agarose gel electrophoresis. A dendrogram was constructed in Bionumerics by the un-weighted pair-group method with the threshold for identical strains set at 95% similarity. RESULTS: C. difficile was successfully isolated from 85% of submitted specimens. For this pilot study, PCR ribotyping was performed on a convenience sample of 70 isolates. C. difficile exhibited substantial diversity: 47 distinct ribotypes were observed among 70 isolates (Figure 1). Fourteen clusters involving identical strain types were observed, totaling 35 isolates. Identical strain types suggestive of direct transmission were evenly split between hospital- (18 of 35, 51%) and community-acquired (17 of 35, 49%) cases. The median time between clustered cases was 50 days (range: 7 to 331 days). Thirty-five of 70 (50%) of all isolates exhibited entirely unique strain types. CONCLUSION: C. difficile isolates in our community hospital exhibited tremendous genetic diversity. The high proportion of strains with entirely unique ribotypes suggests diverse sources of acquisition. These results are consistent with a growing body of literature in which 30–50% of C. difficile isolates are genetically distinct, even when direct transmission was suspected. We are currently expanding our survey to include a network of regional hospitals and clinics, with the goal of better characterizing C. difficile’s diverse and still poorly understood sources. DISCLOSURES: All authors: No reported disclosures. |
format | Online Article Text |
id | pubmed-6253701 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-62537012018-11-28 498. Molecular Epidemiology of C. difficile Within a Community Hospital: A Pilot for a Regional Survey Turner, Nicholas Warren, Bobby Fowler, Vance G Anderson, Deverick J Open Forum Infect Dis Abstracts BACKGROUND: Clostridium difficile is the leading cause of healthcare-associated infection. As incidence rises, its epidemiology is also evolving. 20–50% of cases are now community-acquired; C. difficile cases arise from more diverse sources than previously thought. In this study, we investigated the diversity of C. difficile within a community hospital. METHODS: Stool samples were collected from symptomatic adults with a positive C. difficile PCR admitted to Duke Regional Hospital from July 2016 to July 2017. Healthcare-associated CDI was defined by any admission to a hospital, nursing or dialysis facility in the preceding 30 days. C. difficile was isolated by ethanol shock followed by plating on CDSA media. DNA was extracted using a chelex-based protocol. PCR ribotyping was conducted using the Bidet primers and agarose gel electrophoresis. A dendrogram was constructed in Bionumerics by the un-weighted pair-group method with the threshold for identical strains set at 95% similarity. RESULTS: C. difficile was successfully isolated from 85% of submitted specimens. For this pilot study, PCR ribotyping was performed on a convenience sample of 70 isolates. C. difficile exhibited substantial diversity: 47 distinct ribotypes were observed among 70 isolates (Figure 1). Fourteen clusters involving identical strain types were observed, totaling 35 isolates. Identical strain types suggestive of direct transmission were evenly split between hospital- (18 of 35, 51%) and community-acquired (17 of 35, 49%) cases. The median time between clustered cases was 50 days (range: 7 to 331 days). Thirty-five of 70 (50%) of all isolates exhibited entirely unique strain types. CONCLUSION: C. difficile isolates in our community hospital exhibited tremendous genetic diversity. The high proportion of strains with entirely unique ribotypes suggests diverse sources of acquisition. These results are consistent with a growing body of literature in which 30–50% of C. difficile isolates are genetically distinct, even when direct transmission was suspected. We are currently expanding our survey to include a network of regional hospitals and clinics, with the goal of better characterizing C. difficile’s diverse and still poorly understood sources. DISCLOSURES: All authors: No reported disclosures. Oxford University Press 2018-11-26 /pmc/articles/PMC6253701/ http://dx.doi.org/10.1093/ofid/ofy210.507 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Abstracts Turner, Nicholas Warren, Bobby Fowler, Vance G Anderson, Deverick J 498. Molecular Epidemiology of C. difficile Within a Community Hospital: A Pilot for a Regional Survey |
title | 498. Molecular Epidemiology of C. difficile Within a Community Hospital: A Pilot for a Regional Survey |
title_full | 498. Molecular Epidemiology of C. difficile Within a Community Hospital: A Pilot for a Regional Survey |
title_fullStr | 498. Molecular Epidemiology of C. difficile Within a Community Hospital: A Pilot for a Regional Survey |
title_full_unstemmed | 498. Molecular Epidemiology of C. difficile Within a Community Hospital: A Pilot for a Regional Survey |
title_short | 498. Molecular Epidemiology of C. difficile Within a Community Hospital: A Pilot for a Regional Survey |
title_sort | 498. molecular epidemiology of c. difficile within a community hospital: a pilot for a regional survey |
topic | Abstracts |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6253701/ http://dx.doi.org/10.1093/ofid/ofy210.507 |
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