Cargando…

2085. Evaluation of Panther Fusion Flu A/B/RSV, AdV/hMPV/RV and Paraflu Assays for the Detection of Respiratory Viruses in Children

BACKGROUND: There are many FDA cleared multiplexed respiratory assays available in the United States, ranging from 3 to 20 targets per assay. FilmArray Respiratory Panel (RP) is one of the mega-multiplexed assay, includes 20 targets and results are available in 1 hour. Recently Hologic has received...

Descripción completa

Detalles Bibliográficos
Autores principales: Hassan, Ferdaus, Crawford, Jordan, Banerjee, Dithi, Selvarangan, Rangaraj
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6253867/
http://dx.doi.org/10.1093/ofid/ofy210.1741
_version_ 1783373592606539776
author Hassan, Ferdaus
Crawford, Jordan
Banerjee, Dithi
Selvarangan, Rangaraj
author_facet Hassan, Ferdaus
Crawford, Jordan
Banerjee, Dithi
Selvarangan, Rangaraj
author_sort Hassan, Ferdaus
collection PubMed
description BACKGROUND: There are many FDA cleared multiplexed respiratory assays available in the United States, ranging from 3 to 20 targets per assay. FilmArray Respiratory Panel (RP) is one of the mega-multiplexed assay, includes 20 targets and results are available in 1 hour. Recently Hologic has received FDA-clearance for several smaller respiratory “Panther Fusion assays” (3–4 targets/assay) and results are available in <3 hours. The aim of this study was to evaluate the performance of three panther fusion multiplexed assays: (i) Flu A/B/RSV assay, (ii) adenovirus/human metapneumovirus/rhinovirus assay, and (iii) paraflu (parainfluenza virus 1–4) assay in comparison to RP assay. METHODS: A total of 194 frozen nasopharyngeal swab samples (from 2016 to 2018) obtained from children aged ≤18 years and previously tested by RP as a routine clinical testing were included in this study. These samples were tested by all three fusion assays. Positive percent agreement (PPA) and negative percent agreement (NPA) of Fusion assays were calculated against RP assay. RESULTS: Among 194 samples, 58.0% were from male. Median age was 36 months (IQR 13–72 months). Overall agreement between two assays was 82.5% (95% CI 77.6–88.1). PPA and NPA of Fusion assays for each target was; Flu A-100.0% and 100.0%, Flu B-95.0% and 100.0%, RSV-90.1% and 94.0%, adenovirus-80.0% and 98.2%, hMPV-95.2% and 99.4%, Rhino-79.1% and 95.8%, Parainfluenza virus-100.0 and 100.0%, respectively. There were total 34 discrepant samples. Among these, majority were rhino (n = 12), RSV (n = 12) and adenovirus (n = 7). Of 12 rhinovirus discrepant samples, Fusion assay detected additional seven but missed five samples. For 12 RSV discrepant samples, fusion assay detected 10 more RSV but missed two. Fusion assay missed four adenoviruses and detected additional three samples. All discrepant samples, especially rhinovirus positive samples need further investigation since RP detects both rhinovirus and enterovirus, whereas the Fusion assay detects rhinovirus only. CONCLUSION: Performance of fusion Flu A/B/RSV and Paraflu assays were comparable with RP assays. Fusion AdV/hMPV/RV assay had the highest discrepancy with RP assay. Overall, Panther fusion respiratory assays provide the opportunity to customize testing with smaller respiratory panels at a reduced cost. DISCLOSURES: All authors: No reported disclosures.
format Online
Article
Text
id pubmed-6253867
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-62538672018-11-28 2085. Evaluation of Panther Fusion Flu A/B/RSV, AdV/hMPV/RV and Paraflu Assays for the Detection of Respiratory Viruses in Children Hassan, Ferdaus Crawford, Jordan Banerjee, Dithi Selvarangan, Rangaraj Open Forum Infect Dis Abstracts BACKGROUND: There are many FDA cleared multiplexed respiratory assays available in the United States, ranging from 3 to 20 targets per assay. FilmArray Respiratory Panel (RP) is one of the mega-multiplexed assay, includes 20 targets and results are available in 1 hour. Recently Hologic has received FDA-clearance for several smaller respiratory “Panther Fusion assays” (3–4 targets/assay) and results are available in <3 hours. The aim of this study was to evaluate the performance of three panther fusion multiplexed assays: (i) Flu A/B/RSV assay, (ii) adenovirus/human metapneumovirus/rhinovirus assay, and (iii) paraflu (parainfluenza virus 1–4) assay in comparison to RP assay. METHODS: A total of 194 frozen nasopharyngeal swab samples (from 2016 to 2018) obtained from children aged ≤18 years and previously tested by RP as a routine clinical testing were included in this study. These samples were tested by all three fusion assays. Positive percent agreement (PPA) and negative percent agreement (NPA) of Fusion assays were calculated against RP assay. RESULTS: Among 194 samples, 58.0% were from male. Median age was 36 months (IQR 13–72 months). Overall agreement between two assays was 82.5% (95% CI 77.6–88.1). PPA and NPA of Fusion assays for each target was; Flu A-100.0% and 100.0%, Flu B-95.0% and 100.0%, RSV-90.1% and 94.0%, adenovirus-80.0% and 98.2%, hMPV-95.2% and 99.4%, Rhino-79.1% and 95.8%, Parainfluenza virus-100.0 and 100.0%, respectively. There were total 34 discrepant samples. Among these, majority were rhino (n = 12), RSV (n = 12) and adenovirus (n = 7). Of 12 rhinovirus discrepant samples, Fusion assay detected additional seven but missed five samples. For 12 RSV discrepant samples, fusion assay detected 10 more RSV but missed two. Fusion assay missed four adenoviruses and detected additional three samples. All discrepant samples, especially rhinovirus positive samples need further investigation since RP detects both rhinovirus and enterovirus, whereas the Fusion assay detects rhinovirus only. CONCLUSION: Performance of fusion Flu A/B/RSV and Paraflu assays were comparable with RP assays. Fusion AdV/hMPV/RV assay had the highest discrepancy with RP assay. Overall, Panther fusion respiratory assays provide the opportunity to customize testing with smaller respiratory panels at a reduced cost. DISCLOSURES: All authors: No reported disclosures. Oxford University Press 2018-11-26 /pmc/articles/PMC6253867/ http://dx.doi.org/10.1093/ofid/ofy210.1741 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Abstracts
Hassan, Ferdaus
Crawford, Jordan
Banerjee, Dithi
Selvarangan, Rangaraj
2085. Evaluation of Panther Fusion Flu A/B/RSV, AdV/hMPV/RV and Paraflu Assays for the Detection of Respiratory Viruses in Children
title 2085. Evaluation of Panther Fusion Flu A/B/RSV, AdV/hMPV/RV and Paraflu Assays for the Detection of Respiratory Viruses in Children
title_full 2085. Evaluation of Panther Fusion Flu A/B/RSV, AdV/hMPV/RV and Paraflu Assays for the Detection of Respiratory Viruses in Children
title_fullStr 2085. Evaluation of Panther Fusion Flu A/B/RSV, AdV/hMPV/RV and Paraflu Assays for the Detection of Respiratory Viruses in Children
title_full_unstemmed 2085. Evaluation of Panther Fusion Flu A/B/RSV, AdV/hMPV/RV and Paraflu Assays for the Detection of Respiratory Viruses in Children
title_short 2085. Evaluation of Panther Fusion Flu A/B/RSV, AdV/hMPV/RV and Paraflu Assays for the Detection of Respiratory Viruses in Children
title_sort 2085. evaluation of panther fusion flu a/b/rsv, adv/hmpv/rv and paraflu assays for the detection of respiratory viruses in children
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6253867/
http://dx.doi.org/10.1093/ofid/ofy210.1741
work_keys_str_mv AT hassanferdaus 2085evaluationofpantherfusionfluabrsvadvhmpvrvandparafluassaysforthedetectionofrespiratoryvirusesinchildren
AT crawfordjordan 2085evaluationofpantherfusionfluabrsvadvhmpvrvandparafluassaysforthedetectionofrespiratoryvirusesinchildren
AT banerjeedithi 2085evaluationofpantherfusionfluabrsvadvhmpvrvandparafluassaysforthedetectionofrespiratoryvirusesinchildren
AT selvaranganrangaraj 2085evaluationofpantherfusionfluabrsvadvhmpvrvandparafluassaysforthedetectionofrespiratoryvirusesinchildren