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1513. A New Method for Rapid Phenotypic Antimicrobial Susceptibility Testing Directly from Patient Samples

BACKGROUND: Life-threatening syndromic hospital infections including sepsis, ventilator acquired pneumonia, catheter-associated urinary tract infection (CAUTI), and surgical site infections are often caused by multidrug-resistant pathogens. Implementing the targeted narrow-spectrum antimicrobial the...

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Autor principal: Straus, Don
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6254549/
http://dx.doi.org/10.1093/ofid/ofy210.1342
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author Straus, Don
author_facet Straus, Don
author_sort Straus, Don
collection PubMed
description BACKGROUND: Life-threatening syndromic hospital infections including sepsis, ventilator acquired pneumonia, catheter-associated urinary tract infection (CAUTI), and surgical site infections are often caused by multidrug-resistant pathogens. Implementing the targeted narrow-spectrum antimicrobial therapy as rapidly as possible at the onset of infection is critical for lowering morbidity and mortality for these infections. We present the new MultiPath technology for rapid syndromic infection detection, pathogen identification, and phenotypic antimicrobial susceptibility testing (AST). Our feasibility data demonstrate the technology’s potential application as a rapid CAUTI diagnostic. METHODS: The MultiPath technology detects and counts cells in a 30-minute assay using nonmagnified digital imaging. For identification, target pathogen cells are labeled using fluorescent in situ hybridization (FISH) with rRNA-specific probes, tagged with magnetic nanoparticles, deposited on a surface, imaged, and quantified. For AST, samples are mixed with growth medium, incubated for 4 hours in the presence of serial dilutions of antibiotics, FISH-labeled, magnetically selected, and quantified by digital imaging. The MultiPath assays use a dye-cushion layer to optically sequester the sample and unbound fluorescent probes from the imaging surface, eliminating the need for sample preparation and wash steps. RESULTS: The MultiPath ID method specifically detected a range of common CAUTI pathogens including E. coli, K. pneumonia, E. faecium, E. faecalis, and P. aeruginosa. The limit of detection for E. coli was 27 CFU in a 100 µL assay in 10% urine. We present data demonstrating target inclusivity, specificity, and dynamic range. Our AST feasibility study results show excellent correlation with the broth micro dilution reference test for 5 antibiotics. Variable inoculum levels had little impact on MICs in the study. CONCLUSION: The data presented demonstrate the potential of the rapid ID/AST technology to achieve excellent analytical and clinical performance. This, combined with the method’s simplicity, robustness to sample matrix, and ease-of-use may make the method valuable for rapid syndromic infection diagnostics. DISCLOSURES: All authors: No reported disclosures.
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spelling pubmed-62545492018-11-28 1513. A New Method for Rapid Phenotypic Antimicrobial Susceptibility Testing Directly from Patient Samples Straus, Don Open Forum Infect Dis Abstracts BACKGROUND: Life-threatening syndromic hospital infections including sepsis, ventilator acquired pneumonia, catheter-associated urinary tract infection (CAUTI), and surgical site infections are often caused by multidrug-resistant pathogens. Implementing the targeted narrow-spectrum antimicrobial therapy as rapidly as possible at the onset of infection is critical for lowering morbidity and mortality for these infections. We present the new MultiPath technology for rapid syndromic infection detection, pathogen identification, and phenotypic antimicrobial susceptibility testing (AST). Our feasibility data demonstrate the technology’s potential application as a rapid CAUTI diagnostic. METHODS: The MultiPath technology detects and counts cells in a 30-minute assay using nonmagnified digital imaging. For identification, target pathogen cells are labeled using fluorescent in situ hybridization (FISH) with rRNA-specific probes, tagged with magnetic nanoparticles, deposited on a surface, imaged, and quantified. For AST, samples are mixed with growth medium, incubated for 4 hours in the presence of serial dilutions of antibiotics, FISH-labeled, magnetically selected, and quantified by digital imaging. The MultiPath assays use a dye-cushion layer to optically sequester the sample and unbound fluorescent probes from the imaging surface, eliminating the need for sample preparation and wash steps. RESULTS: The MultiPath ID method specifically detected a range of common CAUTI pathogens including E. coli, K. pneumonia, E. faecium, E. faecalis, and P. aeruginosa. The limit of detection for E. coli was 27 CFU in a 100 µL assay in 10% urine. We present data demonstrating target inclusivity, specificity, and dynamic range. Our AST feasibility study results show excellent correlation with the broth micro dilution reference test for 5 antibiotics. Variable inoculum levels had little impact on MICs in the study. CONCLUSION: The data presented demonstrate the potential of the rapid ID/AST technology to achieve excellent analytical and clinical performance. This, combined with the method’s simplicity, robustness to sample matrix, and ease-of-use may make the method valuable for rapid syndromic infection diagnostics. DISCLOSURES: All authors: No reported disclosures. Oxford University Press 2018-11-26 /pmc/articles/PMC6254549/ http://dx.doi.org/10.1093/ofid/ofy210.1342 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Abstracts
Straus, Don
1513. A New Method for Rapid Phenotypic Antimicrobial Susceptibility Testing Directly from Patient Samples
title 1513. A New Method for Rapid Phenotypic Antimicrobial Susceptibility Testing Directly from Patient Samples
title_full 1513. A New Method for Rapid Phenotypic Antimicrobial Susceptibility Testing Directly from Patient Samples
title_fullStr 1513. A New Method for Rapid Phenotypic Antimicrobial Susceptibility Testing Directly from Patient Samples
title_full_unstemmed 1513. A New Method for Rapid Phenotypic Antimicrobial Susceptibility Testing Directly from Patient Samples
title_short 1513. A New Method for Rapid Phenotypic Antimicrobial Susceptibility Testing Directly from Patient Samples
title_sort 1513. a new method for rapid phenotypic antimicrobial susceptibility testing directly from patient samples
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6254549/
http://dx.doi.org/10.1093/ofid/ofy210.1342
work_keys_str_mv AT strausdon 1513anewmethodforrapidphenotypicantimicrobialsusceptibilitytestingdirectlyfrompatientsamples