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420. A Rapid PCR Assay Detects Fungemia Due to Mixed Candida Species That Is Missed by the Clinical Microbiology Laboratory

BACKGROUND: As identified by blood cultures, ~4% of candidemia is caused by mixed Candida spp. Studies of PCR-based diagnostics, however, suggest that ≥ 2 spp. can be detected in 6%–36% of candidemia. Our objective was to use molecular methods to determine rates of mixed Candida spp. fungemia at our...

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Autores principales: Clancy, Cornelius J, Badrane, Hassan, Nguyen, M Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6254901/
http://dx.doi.org/10.1093/ofid/ofy210.431
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author Clancy, Cornelius J
Badrane, Hassan
Nguyen, M Hong
author_facet Clancy, Cornelius J
Badrane, Hassan
Nguyen, M Hong
author_sort Clancy, Cornelius J
collection PubMed
description BACKGROUND: As identified by blood cultures, ~4% of candidemia is caused by mixed Candida spp. Studies of PCR-based diagnostics, however, suggest that ≥ 2 spp. can be detected in 6%–36% of candidemia. Our objective was to use molecular methods to determine rates of mixed Candida spp. fungemia at our center. METHODS: We devised a rapid, PCR assay that identifies Candida spp. by amplifying ACT1 and accounting for differences in intron sizes. We extracted total DNA from blood culture bottles from 15 patients, from which Candida had been recovered by the clinical microbiology laboratory. RESULTS: Using standard laboratory protocols and MALDI-TOF, candidemia was ascribed to a single Candida sp. in 14 patients. In one patient, C. albicans and C. glabrata co-infection was identified. Using our PCR marker, threepatients (15%) were found to have mixed spp. infections, including the patient known to have C. albicans/C. glabrata co-infection. In one patient diagnosed originally with C. glabrata fungemia, C. albicans was also identified. In one patient diagnosed with C. parapsilosis fungemia, C. fabianii was also identified. In the latter two cases, analysis of colonies recovered from subculturing of blood culture bottles subsequently confirmed the presence of both spp. Comparative phenotypic studies of C. parapsilosis and C. fabianii isolates from the co-infected patient revealed that colony morphologies were indistinguishable on solid agar at 48 hours. Thereafter, C. parapsilosis formed smaller wrinkled colonies, comprised of a mixture of elongated and round cell morphologies, whereas C. fabianii demonstrated round small cells, and formed smooth, big colonies. In addition, C. parapsilosis showed increased agar invasion and echinocandin resistance. C. fabianii had increased growth rate, biofilm formation and resistance to neutrophil killing. CONCLUSION: Mixed Candida spp. may account for more cases of fungemia than currently recognized by clinical laboratories. In some cases, failure to detect mixed spp. infections can have important clinical implications, including failure to appreciate antifungal resistance. It is possible that complementary phenotypic or virulence characteristics between isolates of different spp. may potentiate pathogenesis. More efficient methods of screening for mixed Candida spp. infections are needed for clinical laboratories. DISCLOSURES: All authors: No reported disclosures.
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spelling pubmed-62549012018-11-28 420. A Rapid PCR Assay Detects Fungemia Due to Mixed Candida Species That Is Missed by the Clinical Microbiology Laboratory Clancy, Cornelius J Badrane, Hassan Nguyen, M Hong Open Forum Infect Dis Abstracts BACKGROUND: As identified by blood cultures, ~4% of candidemia is caused by mixed Candida spp. Studies of PCR-based diagnostics, however, suggest that ≥ 2 spp. can be detected in 6%–36% of candidemia. Our objective was to use molecular methods to determine rates of mixed Candida spp. fungemia at our center. METHODS: We devised a rapid, PCR assay that identifies Candida spp. by amplifying ACT1 and accounting for differences in intron sizes. We extracted total DNA from blood culture bottles from 15 patients, from which Candida had been recovered by the clinical microbiology laboratory. RESULTS: Using standard laboratory protocols and MALDI-TOF, candidemia was ascribed to a single Candida sp. in 14 patients. In one patient, C. albicans and C. glabrata co-infection was identified. Using our PCR marker, threepatients (15%) were found to have mixed spp. infections, including the patient known to have C. albicans/C. glabrata co-infection. In one patient diagnosed originally with C. glabrata fungemia, C. albicans was also identified. In one patient diagnosed with C. parapsilosis fungemia, C. fabianii was also identified. In the latter two cases, analysis of colonies recovered from subculturing of blood culture bottles subsequently confirmed the presence of both spp. Comparative phenotypic studies of C. parapsilosis and C. fabianii isolates from the co-infected patient revealed that colony morphologies were indistinguishable on solid agar at 48 hours. Thereafter, C. parapsilosis formed smaller wrinkled colonies, comprised of a mixture of elongated and round cell morphologies, whereas C. fabianii demonstrated round small cells, and formed smooth, big colonies. In addition, C. parapsilosis showed increased agar invasion and echinocandin resistance. C. fabianii had increased growth rate, biofilm formation and resistance to neutrophil killing. CONCLUSION: Mixed Candida spp. may account for more cases of fungemia than currently recognized by clinical laboratories. In some cases, failure to detect mixed spp. infections can have important clinical implications, including failure to appreciate antifungal resistance. It is possible that complementary phenotypic or virulence characteristics between isolates of different spp. may potentiate pathogenesis. More efficient methods of screening for mixed Candida spp. infections are needed for clinical laboratories. DISCLOSURES: All authors: No reported disclosures. Oxford University Press 2018-11-26 /pmc/articles/PMC6254901/ http://dx.doi.org/10.1093/ofid/ofy210.431 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Abstracts
Clancy, Cornelius J
Badrane, Hassan
Nguyen, M Hong
420. A Rapid PCR Assay Detects Fungemia Due to Mixed Candida Species That Is Missed by the Clinical Microbiology Laboratory
title 420. A Rapid PCR Assay Detects Fungemia Due to Mixed Candida Species That Is Missed by the Clinical Microbiology Laboratory
title_full 420. A Rapid PCR Assay Detects Fungemia Due to Mixed Candida Species That Is Missed by the Clinical Microbiology Laboratory
title_fullStr 420. A Rapid PCR Assay Detects Fungemia Due to Mixed Candida Species That Is Missed by the Clinical Microbiology Laboratory
title_full_unstemmed 420. A Rapid PCR Assay Detects Fungemia Due to Mixed Candida Species That Is Missed by the Clinical Microbiology Laboratory
title_short 420. A Rapid PCR Assay Detects Fungemia Due to Mixed Candida Species That Is Missed by the Clinical Microbiology Laboratory
title_sort 420. a rapid pcr assay detects fungemia due to mixed candida species that is missed by the clinical microbiology laboratory
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6254901/
http://dx.doi.org/10.1093/ofid/ofy210.431
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