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523. Use of Whole-Genome Sequencing to Guide a C. difficile Diagnostic Stewardship Program
BACKGROUND: Hospital-onset C. difficile infection (HO-CDI) has been problematic at our hospital, with rates almost 50% greater than predicted. C. difficile whole-genome sequencing (WGS) data were used to define the transmission pattern, followed by a diagnostic stewardship intervention. METHODS: Iso...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6254954/ http://dx.doi.org/10.1093/ofid/ofy210.532 |
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author | Jakharia, Kunal Ilaiwy, Ghassan Moose, Siobhan Waga, Masahi McAlduff, Joel Karanfil, Lynne Mcgann, Patrick Wortmann, Glenn |
author_facet | Jakharia, Kunal Ilaiwy, Ghassan Moose, Siobhan Waga, Masahi McAlduff, Joel Karanfil, Lynne Mcgann, Patrick Wortmann, Glenn |
author_sort | Jakharia, Kunal |
collection | PubMed |
description | BACKGROUND: Hospital-onset C. difficile infection (HO-CDI) has been problematic at our hospital, with rates almost 50% greater than predicted. C. difficile whole-genome sequencing (WGS) data were used to define the transmission pattern, followed by a diagnostic stewardship intervention. METHODS: Isolates from CDI cases were sequenced for strain relatedness and epidemiologically analyzed using a single nucleotide polymorphism (SNP)-based approach. In June 2017, a diagnostic stewardship intervention began which included provider education and a weekday review of CDI orders placed after hospital day 3 for the following indications: >3 stools/24 hours, the absence of laxative administration, the presence of fever/leukocytosis or a history of inflammatory bowel disease. In November 2017, an EMR-based testing algorithm was introduced to supplement the review process. Orders not meeting testing criteria were discussed with the ordering provider, with a suggestion to cancel orders without appropriate indications. RESULTS: WGS assigned 36 isolates to 19 different multi-locus sequence types (ST), including five assigned to ST-1, a sequence that encompasses the ribotype 027 clade (Figure 1). SNP-based analysis indicated closely related, but non-identical strains, inconsistent with nosocomial transmission. Six hundred forty-six CDI orders were reviewed, of which 421 (65%) met criteria and 64 (15%) were positive. Two hundred twenty-five (35%) of orders were recommended for cancellation. The HO-CDI rate decreased from 11.67/10k in the 5-month baseline period to 7.13/10k in the 9-month intervention period (P = 0.0008) (Figure 2). CONCLUSION: WGS revealed that nosocomial transmission of C. difficile was an unlikely cause for our elevated CO-CDI rate. A diagnostic stewardship intervention which focused on identifying community-acquired infection and avoiding over-testing was associated with a sustained decrease in the HO-CDI rate which has persisted for 9 months. DISCLOSURES: All authors: No reported disclosures. |
format | Online Article Text |
id | pubmed-6254954 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-62549542018-11-28 523. Use of Whole-Genome Sequencing to Guide a C. difficile Diagnostic Stewardship Program Jakharia, Kunal Ilaiwy, Ghassan Moose, Siobhan Waga, Masahi McAlduff, Joel Karanfil, Lynne Mcgann, Patrick Wortmann, Glenn Open Forum Infect Dis Abstracts BACKGROUND: Hospital-onset C. difficile infection (HO-CDI) has been problematic at our hospital, with rates almost 50% greater than predicted. C. difficile whole-genome sequencing (WGS) data were used to define the transmission pattern, followed by a diagnostic stewardship intervention. METHODS: Isolates from CDI cases were sequenced for strain relatedness and epidemiologically analyzed using a single nucleotide polymorphism (SNP)-based approach. In June 2017, a diagnostic stewardship intervention began which included provider education and a weekday review of CDI orders placed after hospital day 3 for the following indications: >3 stools/24 hours, the absence of laxative administration, the presence of fever/leukocytosis or a history of inflammatory bowel disease. In November 2017, an EMR-based testing algorithm was introduced to supplement the review process. Orders not meeting testing criteria were discussed with the ordering provider, with a suggestion to cancel orders without appropriate indications. RESULTS: WGS assigned 36 isolates to 19 different multi-locus sequence types (ST), including five assigned to ST-1, a sequence that encompasses the ribotype 027 clade (Figure 1). SNP-based analysis indicated closely related, but non-identical strains, inconsistent with nosocomial transmission. Six hundred forty-six CDI orders were reviewed, of which 421 (65%) met criteria and 64 (15%) were positive. Two hundred twenty-five (35%) of orders were recommended for cancellation. The HO-CDI rate decreased from 11.67/10k in the 5-month baseline period to 7.13/10k in the 9-month intervention period (P = 0.0008) (Figure 2). CONCLUSION: WGS revealed that nosocomial transmission of C. difficile was an unlikely cause for our elevated CO-CDI rate. A diagnostic stewardship intervention which focused on identifying community-acquired infection and avoiding over-testing was associated with a sustained decrease in the HO-CDI rate which has persisted for 9 months. DISCLOSURES: All authors: No reported disclosures. Oxford University Press 2018-11-26 /pmc/articles/PMC6254954/ http://dx.doi.org/10.1093/ofid/ofy210.532 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Abstracts Jakharia, Kunal Ilaiwy, Ghassan Moose, Siobhan Waga, Masahi McAlduff, Joel Karanfil, Lynne Mcgann, Patrick Wortmann, Glenn 523. Use of Whole-Genome Sequencing to Guide a C. difficile Diagnostic Stewardship Program |
title | 523. Use of Whole-Genome Sequencing to Guide a C. difficile Diagnostic Stewardship Program |
title_full | 523. Use of Whole-Genome Sequencing to Guide a C. difficile Diagnostic Stewardship Program |
title_fullStr | 523. Use of Whole-Genome Sequencing to Guide a C. difficile Diagnostic Stewardship Program |
title_full_unstemmed | 523. Use of Whole-Genome Sequencing to Guide a C. difficile Diagnostic Stewardship Program |
title_short | 523. Use of Whole-Genome Sequencing to Guide a C. difficile Diagnostic Stewardship Program |
title_sort | 523. use of whole-genome sequencing to guide a c. difficile diagnostic stewardship program |
topic | Abstracts |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6254954/ http://dx.doi.org/10.1093/ofid/ofy210.532 |
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