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2374. Genomic Characteristics of Recurrent Staphylococcus aureus Skin and Soft-Tissue Infection Among US Army Trainees

BACKGROUND: Skin and soft-tissue infections (SSTI) are common among military recruits, and some experience recurrent SSTI (two infections ≥30 days apart) during training. We used whole-genome sequencing (WGS) to assess the relatedness of strains from recurrent S. aureus SSTI cases and their close co...

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Autores principales: Verratti, Kathleen, Player, Robert, Wood, Shannon, Schlett, Carey, Elassal, Emad, Forsyth, Ellen, Ellis, Michael, Tribble, David R, Millar, Eugene, Bennett, Jason
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6255060/
http://dx.doi.org/10.1093/ofid/ofy210.2027
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author Verratti, Kathleen
Player, Robert
Wood, Shannon
Schlett, Carey
Elassal, Emad
Forsyth, Ellen
Ellis, Michael
Tribble, David R
Millar, Eugene
Bennett, Jason
author_facet Verratti, Kathleen
Player, Robert
Wood, Shannon
Schlett, Carey
Elassal, Emad
Forsyth, Ellen
Ellis, Michael
Tribble, David R
Millar, Eugene
Bennett, Jason
author_sort Verratti, Kathleen
collection PubMed
description BACKGROUND: Skin and soft-tissue infections (SSTI) are common among military recruits, and some experience recurrent SSTI (two infections ≥30 days apart) during training. We used whole-genome sequencing (WGS) to assess the relatedness of strains from recurrent S. aureus SSTI cases and their close contacts. METHODS: From 2010 to 2014, we prospectively identified SSTI cases among US Army Infantry trainees (Fort Benning, GA), obtaining infection swabs at the time of presentation for all SSTIs and multiple anatomic site colonization swabs at the time of presentation for the first infection. Thereafter, we selected cases of recurrent S. aureus SSTI with phenotypically concordant paired isolates (e.g., MRSA-MRSA). We also selected concordant colonization isolates from recurrent cases as well as concordant infection isolates from SSTI cases in the same training class as the recurrent case. Isolates were characterized by WGS. The number of single nucleotide polymorphism (SNP) differences between isolates was calculated. Phylogenetic trees were constructed to identify patterns of intra- vs. extra-host S. aureus acquisition among cases of recurrent infection. RESULTS: We identified 23 cases of recurrent S. aureus SSTI with concordant infection isolates (18 MRSA). The median (range) pairwise SNP difference for intrahost infection isolates was 15 (0–3,768); 12 (0–348), MRSA and 310 (3–3,768), MSSA. Nine (39%) were colonized with a concordant strain (5 MRSA), yielding 14 colonization isolates (7 MRSA). The median pairwise SNP difference between intrahost colonization and recurrent infection isolates was 57 (2–3,582); 5 (2–3,582), MRSA and 167 (2–313), MSSA. Infection isolates from 33 proximal cases (27 MRSA) were identified. The median pairwise SNP difference between recurrent infection isolates and that of a proximal case was 24 (1–531); 20 (1–216), MRSA and 307 (286–531), MSSA. Variant analysis showed no difference between the number of putative high impact SNPs between infection (μ = 11, σ = 20) and colonization (μ = 19, σ = 42) isolates. CONCLUSION: WGS of S. aureus from recurrent SSTI suggests patterns of intra-host reinfection as well as intra-host acquisition/infection. Targeted decolonization may prevent recurrent S. aureus SSTI. DISCLOSURES: All authors: No reported disclosures.
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spelling pubmed-62550602018-11-28 2374. Genomic Characteristics of Recurrent Staphylococcus aureus Skin and Soft-Tissue Infection Among US Army Trainees Verratti, Kathleen Player, Robert Wood, Shannon Schlett, Carey Elassal, Emad Forsyth, Ellen Ellis, Michael Tribble, David R Millar, Eugene Bennett, Jason Open Forum Infect Dis Abstracts BACKGROUND: Skin and soft-tissue infections (SSTI) are common among military recruits, and some experience recurrent SSTI (two infections ≥30 days apart) during training. We used whole-genome sequencing (WGS) to assess the relatedness of strains from recurrent S. aureus SSTI cases and their close contacts. METHODS: From 2010 to 2014, we prospectively identified SSTI cases among US Army Infantry trainees (Fort Benning, GA), obtaining infection swabs at the time of presentation for all SSTIs and multiple anatomic site colonization swabs at the time of presentation for the first infection. Thereafter, we selected cases of recurrent S. aureus SSTI with phenotypically concordant paired isolates (e.g., MRSA-MRSA). We also selected concordant colonization isolates from recurrent cases as well as concordant infection isolates from SSTI cases in the same training class as the recurrent case. Isolates were characterized by WGS. The number of single nucleotide polymorphism (SNP) differences between isolates was calculated. Phylogenetic trees were constructed to identify patterns of intra- vs. extra-host S. aureus acquisition among cases of recurrent infection. RESULTS: We identified 23 cases of recurrent S. aureus SSTI with concordant infection isolates (18 MRSA). The median (range) pairwise SNP difference for intrahost infection isolates was 15 (0–3,768); 12 (0–348), MRSA and 310 (3–3,768), MSSA. Nine (39%) were colonized with a concordant strain (5 MRSA), yielding 14 colonization isolates (7 MRSA). The median pairwise SNP difference between intrahost colonization and recurrent infection isolates was 57 (2–3,582); 5 (2–3,582), MRSA and 167 (2–313), MSSA. Infection isolates from 33 proximal cases (27 MRSA) were identified. The median pairwise SNP difference between recurrent infection isolates and that of a proximal case was 24 (1–531); 20 (1–216), MRSA and 307 (286–531), MSSA. Variant analysis showed no difference between the number of putative high impact SNPs between infection (μ = 11, σ = 20) and colonization (μ = 19, σ = 42) isolates. CONCLUSION: WGS of S. aureus from recurrent SSTI suggests patterns of intra-host reinfection as well as intra-host acquisition/infection. Targeted decolonization may prevent recurrent S. aureus SSTI. DISCLOSURES: All authors: No reported disclosures. Oxford University Press 2018-11-26 /pmc/articles/PMC6255060/ http://dx.doi.org/10.1093/ofid/ofy210.2027 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Abstracts
Verratti, Kathleen
Player, Robert
Wood, Shannon
Schlett, Carey
Elassal, Emad
Forsyth, Ellen
Ellis, Michael
Tribble, David R
Millar, Eugene
Bennett, Jason
2374. Genomic Characteristics of Recurrent Staphylococcus aureus Skin and Soft-Tissue Infection Among US Army Trainees
title 2374. Genomic Characteristics of Recurrent Staphylococcus aureus Skin and Soft-Tissue Infection Among US Army Trainees
title_full 2374. Genomic Characteristics of Recurrent Staphylococcus aureus Skin and Soft-Tissue Infection Among US Army Trainees
title_fullStr 2374. Genomic Characteristics of Recurrent Staphylococcus aureus Skin and Soft-Tissue Infection Among US Army Trainees
title_full_unstemmed 2374. Genomic Characteristics of Recurrent Staphylococcus aureus Skin and Soft-Tissue Infection Among US Army Trainees
title_short 2374. Genomic Characteristics of Recurrent Staphylococcus aureus Skin and Soft-Tissue Infection Among US Army Trainees
title_sort 2374. genomic characteristics of recurrent staphylococcus aureus skin and soft-tissue infection among us army trainees
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6255060/
http://dx.doi.org/10.1093/ofid/ofy210.2027
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