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1118. Viral Species Richness and Composition in Young Children With Loose or Watery Stool in Ethiopia
BACKGROUND: Stool consistency is an important diagnostic criterion in both research and clinical medicine and is often used to define diarrheal disease. METHODS: We examine the pediatric enteric virome across stool consistency to evaluate differences in richness and community composition using fecal...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6255074/ http://dx.doi.org/10.1093/ofid/ofy210.951 |
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author | Aiemjoy, Kristen Altan, Eda Aragie, Solomon Fry, Dionna Phan, Tung Deng, Xutao Chanyalew, Melsew Tadesse, Zerihun Callahan, Kelly Delwart, Eric Keenan, Jeremy |
author_facet | Aiemjoy, Kristen Altan, Eda Aragie, Solomon Fry, Dionna Phan, Tung Deng, Xutao Chanyalew, Melsew Tadesse, Zerihun Callahan, Kelly Delwart, Eric Keenan, Jeremy |
author_sort | Aiemjoy, Kristen |
collection | PubMed |
description | BACKGROUND: Stool consistency is an important diagnostic criterion in both research and clinical medicine and is often used to define diarrheal disease. METHODS: We examine the pediatric enteric virome across stool consistency to evaluate differences in richness and community composition using fecal samples collected from children participating in a clinical trial in the Amhara region of Ethiopia. The consistency of each sample was graded according to the modified Bristol Stool Form Scale for children (mBSFS-C) before a portion of stool was preserved for viral metagenomic analysis. Stool samples were grouped into 29 pools according to stool consistency type. Differential abundance was determined using negative-binomial modeling. RESULTS: Of 446 censused children who were eligible to participate, 317 presented for the study visit examination and 269 provided stool samples. The mean age of children with stool samples was 2.7 years old. Species richness was highest in watery-consistency stool and decreased as stool consistency became firmer (Spearman’s r = −0.45, P = 0.013).The greatest differential abundance comparing loose or watery to formed stool was for norovirus GII (7.64, 95% CI 5.8, 9.5) followed by aichivirus A (5.93, 95% CI 4.0, 7.89) and adeno-associated virus 2 (5.81, 95% CI 3.9, 7.7). CONCLUSION: We documented a difference in pediatric enteric viromes according to mBSFS-C stool consistency category, both in species richness and composition. Our results suggest that loose or watery stool, as measured by the mBSFS-C, may signal enteric viral infection in young children. Additional studies are warranted to confirm these findings. DISCLOSURES: All authors: No reported disclosures. |
format | Online Article Text |
id | pubmed-6255074 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-62550742018-11-28 1118. Viral Species Richness and Composition in Young Children With Loose or Watery Stool in Ethiopia Aiemjoy, Kristen Altan, Eda Aragie, Solomon Fry, Dionna Phan, Tung Deng, Xutao Chanyalew, Melsew Tadesse, Zerihun Callahan, Kelly Delwart, Eric Keenan, Jeremy Open Forum Infect Dis Abstracts BACKGROUND: Stool consistency is an important diagnostic criterion in both research and clinical medicine and is often used to define diarrheal disease. METHODS: We examine the pediatric enteric virome across stool consistency to evaluate differences in richness and community composition using fecal samples collected from children participating in a clinical trial in the Amhara region of Ethiopia. The consistency of each sample was graded according to the modified Bristol Stool Form Scale for children (mBSFS-C) before a portion of stool was preserved for viral metagenomic analysis. Stool samples were grouped into 29 pools according to stool consistency type. Differential abundance was determined using negative-binomial modeling. RESULTS: Of 446 censused children who were eligible to participate, 317 presented for the study visit examination and 269 provided stool samples. The mean age of children with stool samples was 2.7 years old. Species richness was highest in watery-consistency stool and decreased as stool consistency became firmer (Spearman’s r = −0.45, P = 0.013).The greatest differential abundance comparing loose or watery to formed stool was for norovirus GII (7.64, 95% CI 5.8, 9.5) followed by aichivirus A (5.93, 95% CI 4.0, 7.89) and adeno-associated virus 2 (5.81, 95% CI 3.9, 7.7). CONCLUSION: We documented a difference in pediatric enteric viromes according to mBSFS-C stool consistency category, both in species richness and composition. Our results suggest that loose or watery stool, as measured by the mBSFS-C, may signal enteric viral infection in young children. Additional studies are warranted to confirm these findings. DISCLOSURES: All authors: No reported disclosures. Oxford University Press 2018-11-26 /pmc/articles/PMC6255074/ http://dx.doi.org/10.1093/ofid/ofy210.951 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Abstracts Aiemjoy, Kristen Altan, Eda Aragie, Solomon Fry, Dionna Phan, Tung Deng, Xutao Chanyalew, Melsew Tadesse, Zerihun Callahan, Kelly Delwart, Eric Keenan, Jeremy 1118. Viral Species Richness and Composition in Young Children With Loose or Watery Stool in Ethiopia |
title | 1118. Viral Species Richness and Composition in Young Children With Loose or Watery Stool in Ethiopia |
title_full | 1118. Viral Species Richness and Composition in Young Children With Loose or Watery Stool in Ethiopia |
title_fullStr | 1118. Viral Species Richness and Composition in Young Children With Loose or Watery Stool in Ethiopia |
title_full_unstemmed | 1118. Viral Species Richness and Composition in Young Children With Loose or Watery Stool in Ethiopia |
title_short | 1118. Viral Species Richness and Composition in Young Children With Loose or Watery Stool in Ethiopia |
title_sort | 1118. viral species richness and composition in young children with loose or watery stool in ethiopia |
topic | Abstracts |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6255074/ http://dx.doi.org/10.1093/ofid/ofy210.951 |
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