Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing

Here, we describe the complete genome sequences of two Bordetella pertussis strains, FR5810, a clinical isolate recovered from the respiratory tract of an infant, and Tohama, a key reference strain for the species. Sequences were obtained using a hybrid approach combining Oxford Nanopore Technologie...

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Detalles Bibliográficos
Autores principales: Bouchez, Valérie, Baines, Sarah Louise, Guillot, Sophie, Brisse, Sylvain
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6256476/
https://www.ncbi.nlm.nih.gov/pubmed/30533789
http://dx.doi.org/10.1128/MRA.01207-18
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author Bouchez, Valérie
Baines, Sarah Louise
Guillot, Sophie
Brisse, Sylvain
author_facet Bouchez, Valérie
Baines, Sarah Louise
Guillot, Sophie
Brisse, Sylvain
author_sort Bouchez, Valérie
collection PubMed
description Here, we describe the complete genome sequences of two Bordetella pertussis strains, FR5810, a clinical isolate recovered from the respiratory tract of an infant, and Tohama, a key reference strain for the species. Sequences were obtained using a hybrid approach combining Oxford Nanopore Technologies MinION and Illumina NextSeq 500 sequence data.
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spelling pubmed-62564762018-12-07 Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing Bouchez, Valérie Baines, Sarah Louise Guillot, Sophie Brisse, Sylvain Microbiol Resour Announc Genome Sequences Here, we describe the complete genome sequences of two Bordetella pertussis strains, FR5810, a clinical isolate recovered from the respiratory tract of an infant, and Tohama, a key reference strain for the species. Sequences were obtained using a hybrid approach combining Oxford Nanopore Technologies MinION and Illumina NextSeq 500 sequence data. American Society for Microbiology 2018-11-15 /pmc/articles/PMC6256476/ /pubmed/30533789 http://dx.doi.org/10.1128/MRA.01207-18 Text en Copyright © 2018 Bouchez et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Bouchez, Valérie
Baines, Sarah Louise
Guillot, Sophie
Brisse, Sylvain
Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing
title Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing
title_full Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing
title_fullStr Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing
title_full_unstemmed Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing
title_short Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing
title_sort complete genome sequences of bordetella pertussis clinical isolate fr5810 and reference strain tohama from combined oxford nanopore and illumina sequencing
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6256476/
https://www.ncbi.nlm.nih.gov/pubmed/30533789
http://dx.doi.org/10.1128/MRA.01207-18
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