Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing

Deterioration of sediment quality has been found in the Nakdong River Estuary after large-scale reclamations. Here, I report microbial diversity in sediments of Nakdong River Estuary in the Republic of Korea based on 16S rRNA gene sequencing by next-generation sequencing (NGS) techniques. The domina...

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Detalles Bibliográficos
Autor principal: Kim, Kyunghoi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2018
Materias:
Amplicon Sequence Collections
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6256640/
https://www.ncbi.nlm.nih.gov/pubmed/30533709
http://dx.doi.org/10.1128/MRA.01186-18
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author Kim, Kyunghoi
author_facet Kim, Kyunghoi
author_sort Kim, Kyunghoi
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description Deterioration of sediment quality has been found in the Nakdong River Estuary after large-scale reclamations. Here, I report microbial diversity in sediments of Nakdong River Estuary in the Republic of Korea based on 16S rRNA gene sequencing by next-generation sequencing (NGS) techniques. The dominant bacterial phyla were Proteobacteria, Firmicutes, Bacteroidetes, and Planctomycetes.
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spelling pubmed-62566402018-12-07 Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing Kim, Kyunghoi Microbiol Resour Announc Amplicon Sequence Collections Deterioration of sediment quality has been found in the Nakdong River Estuary after large-scale reclamations. Here, I report microbial diversity in sediments of Nakdong River Estuary in the Republic of Korea based on 16S rRNA gene sequencing by next-generation sequencing (NGS) techniques. The dominant bacterial phyla were Proteobacteria, Firmicutes, Bacteroidetes, and Planctomycetes. American Society for Microbiology 2018-10-11 /pmc/articles/PMC6256640/ /pubmed/30533709 http://dx.doi.org/10.1128/MRA.01186-18 Text en Copyright © 2018 Kim. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Amplicon Sequence Collections
Kim, Kyunghoi
Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing
title Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing
title_full Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing
title_fullStr Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing
title_full_unstemmed Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing
title_short Microbial Diversity Analysis of Sediment from Nakdong River Estuary in the Republic of Korea Using 16S rRNA Gene Amplicon Sequencing
title_sort microbial diversity analysis of sediment from nakdong river estuary in the republic of korea using 16s rrna gene amplicon sequencing
topic Amplicon Sequence Collections
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6256640/
https://www.ncbi.nlm.nih.gov/pubmed/30533709
http://dx.doi.org/10.1128/MRA.01186-18
work_keys_str_mv AT kimkyunghoi microbialdiversityanalysisofsedimentfromnakdongriverestuaryintherepublicofkoreausing16srrnageneampliconsequencing

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