Genome-wide polyadenylation site mapping datasets in the rice blast fungus Magnaporthe oryzae

Polyadenylation plays an important role in gene regulation, thus affecting a wide variety of biological processes. In the rice blast fungus Magnaporthe oryzae the cleavage factor I protein Rpb35 is required for pre-mRNA polyadenylation and fungal virulence. Here we present the bioinformatic approach...

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Autores principales: Marconi, Marco, Sesma, Ane, Rodríguez-Romero, Julio Luis, González, María Lourdes Rosano, Wilkinson, Mark D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2018
Materias:
Data Descriptor
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6257040/
https://www.ncbi.nlm.nih.gov/pubmed/30480660
http://dx.doi.org/10.1038/sdata.2018.271
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author Marconi, Marco
Sesma, Ane
Rodríguez-Romero, Julio Luis
González, María Lourdes Rosano
Wilkinson, Mark D.
author_facet Marconi, Marco
Sesma, Ane
Rodríguez-Romero, Julio Luis
González, María Lourdes Rosano
Wilkinson, Mark D.
author_sort Marconi, Marco
collection PubMed
description Polyadenylation plays an important role in gene regulation, thus affecting a wide variety of biological processes. In the rice blast fungus Magnaporthe oryzae the cleavage factor I protein Rpb35 is required for pre-mRNA polyadenylation and fungal virulence. Here we present the bioinformatic approach and output data related to a global survey of polyadenylation site usage in M. oryzae wild-type and [Formula: see text] rbp35 strains under a variety of nutrient conditions, some of which simulate the conditions experienced by the fungus during part of its infection cycle.
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spelling pubmed-62570402018-11-28 Genome-wide polyadenylation site mapping datasets in the rice blast fungus Magnaporthe oryzae Marconi, Marco Sesma, Ane Rodríguez-Romero, Julio Luis González, María Lourdes Rosano Wilkinson, Mark D. Sci Data Data Descriptor Polyadenylation plays an important role in gene regulation, thus affecting a wide variety of biological processes. In the rice blast fungus Magnaporthe oryzae the cleavage factor I protein Rpb35 is required for pre-mRNA polyadenylation and fungal virulence. Here we present the bioinformatic approach and output data related to a global survey of polyadenylation site usage in M. oryzae wild-type and [Formula: see text] rbp35 strains under a variety of nutrient conditions, some of which simulate the conditions experienced by the fungus during part of its infection cycle. Nature Publishing Group 2018-11-27 /pmc/articles/PMC6257040/ /pubmed/30480660 http://dx.doi.org/10.1038/sdata.2018.271 Text en Copyright © 2018, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files made available in this article.
spellingShingle Data Descriptor
Marconi, Marco
Sesma, Ane
Rodríguez-Romero, Julio Luis
González, María Lourdes Rosano
Wilkinson, Mark D.
Genome-wide polyadenylation site mapping datasets in the rice blast fungus Magnaporthe oryzae
title Genome-wide polyadenylation site mapping datasets in the rice blast fungus Magnaporthe oryzae
title_full Genome-wide polyadenylation site mapping datasets in the rice blast fungus Magnaporthe oryzae
title_fullStr Genome-wide polyadenylation site mapping datasets in the rice blast fungus Magnaporthe oryzae
title_full_unstemmed Genome-wide polyadenylation site mapping datasets in the rice blast fungus Magnaporthe oryzae
title_short Genome-wide polyadenylation site mapping datasets in the rice blast fungus Magnaporthe oryzae
title_sort genome-wide polyadenylation site mapping datasets in the rice blast fungus magnaporthe oryzae
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6257040/
https://www.ncbi.nlm.nih.gov/pubmed/30480660
http://dx.doi.org/10.1038/sdata.2018.271
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