Draft genome sequence of a uropathogenic Escherichia coli isolate (ST38 O1:H15) from Pakistan, an emerging multidrug-resistant sequence type with a high virulence profile

Sequence type 38 is considered a uropathogenic Escherichia coli/enteroaggregative E. coli hybrid associated with multidrug resistance and urinary tract infections. The draft genome sequence of UEC59 from a woman in Pakistan revealed a 5 324 938 bp genome with 5386 coding sequences (CDS), 86 transfer...

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Detalles Bibliográficos
Autores principales: Rafaque, Z., Dasti, J.I., Andrews, S.C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Taxonogenomics: Genome of a Known Organism
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6258363/
https://www.ncbi.nlm.nih.gov/pubmed/30510766
http://dx.doi.org/10.1016/j.nmni.2018.10.004
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author Rafaque, Z.
Dasti, J.I.
Andrews, S.C.
author_facet Rafaque, Z.
Dasti, J.I.
Andrews, S.C.
author_sort Rafaque, Z.
collection PubMed
description Sequence type 38 is considered a uropathogenic Escherichia coli/enteroaggregative E. coli hybrid associated with multidrug resistance and urinary tract infections. The draft genome sequence of UEC59 from a woman in Pakistan revealed a 5 324 938 bp genome with 5386 coding sequences (CDS), 86 transfer RNA genes and multiple antibiotic resistance genes (bla(TEM-1), CMY-2, sul1, sul2, dfrA17, tetA, mphA) and mobile elements (int1, two transposons, 30 insertion sequence elements, one integrative conjugative element, four plasmids, five prophages), along with many virulence genes.
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spelling pubmed-62583632018-12-03 Draft genome sequence of a uropathogenic Escherichia coli isolate (ST38 O1:H15) from Pakistan, an emerging multidrug-resistant sequence type with a high virulence profile Rafaque, Z. Dasti, J.I. Andrews, S.C. New Microbes New Infect Taxonogenomics: Genome of a Known Organism Sequence type 38 is considered a uropathogenic Escherichia coli/enteroaggregative E. coli hybrid associated with multidrug resistance and urinary tract infections. The draft genome sequence of UEC59 from a woman in Pakistan revealed a 5 324 938 bp genome with 5386 coding sequences (CDS), 86 transfer RNA genes and multiple antibiotic resistance genes (bla(TEM-1), CMY-2, sul1, sul2, dfrA17, tetA, mphA) and mobile elements (int1, two transposons, 30 insertion sequence elements, one integrative conjugative element, four plasmids, five prophages), along with many virulence genes. Elsevier 2018-10-19 /pmc/articles/PMC6258363/ /pubmed/30510766 http://dx.doi.org/10.1016/j.nmni.2018.10.004 Text en © 2018 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Taxonogenomics: Genome of a Known Organism
Rafaque, Z.
Dasti, J.I.
Andrews, S.C.
Draft genome sequence of a uropathogenic Escherichia coli isolate (ST38 O1:H15) from Pakistan, an emerging multidrug-resistant sequence type with a high virulence profile
title Draft genome sequence of a uropathogenic Escherichia coli isolate (ST38 O1:H15) from Pakistan, an emerging multidrug-resistant sequence type with a high virulence profile
title_full Draft genome sequence of a uropathogenic Escherichia coli isolate (ST38 O1:H15) from Pakistan, an emerging multidrug-resistant sequence type with a high virulence profile
title_fullStr Draft genome sequence of a uropathogenic Escherichia coli isolate (ST38 O1:H15) from Pakistan, an emerging multidrug-resistant sequence type with a high virulence profile
title_full_unstemmed Draft genome sequence of a uropathogenic Escherichia coli isolate (ST38 O1:H15) from Pakistan, an emerging multidrug-resistant sequence type with a high virulence profile
title_short Draft genome sequence of a uropathogenic Escherichia coli isolate (ST38 O1:H15) from Pakistan, an emerging multidrug-resistant sequence type with a high virulence profile
title_sort draft genome sequence of a uropathogenic escherichia coli isolate (st38 o1:h15) from pakistan, an emerging multidrug-resistant sequence type with a high virulence profile
topic Taxonogenomics: Genome of a Known Organism
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6258363/
https://www.ncbi.nlm.nih.gov/pubmed/30510766
http://dx.doi.org/10.1016/j.nmni.2018.10.004
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