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Invasion and effective size of graph-structured populations
Population structure can strongly affect evolutionary dynamics. The most general way to describe population structures are graphs. An important observable on evolutionary graphs is the probability that a novel mutation spreads through the entire population. But what drives this spread of a mutation...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6258371/ https://www.ncbi.nlm.nih.gov/pubmed/30419017 http://dx.doi.org/10.1371/journal.pcbi.1006559 |
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author | Giaimo, Stefano Arranz, Jordi Traulsen, Arne |
author_facet | Giaimo, Stefano Arranz, Jordi Traulsen, Arne |
author_sort | Giaimo, Stefano |
collection | PubMed |
description | Population structure can strongly affect evolutionary dynamics. The most general way to describe population structures are graphs. An important observable on evolutionary graphs is the probability that a novel mutation spreads through the entire population. But what drives this spread of a mutation towards fixation? Here, we propose a novel way to understand the forces driving fixation by borrowing techniques from evolutionary demography to quantify the invasion fitness and the effective population size for different graphs. Our method is very general and even applies to weighted graphs with node dependent fitness. However, we focus on analytical results for undirected graphs with node independent fitness. The method will allow to conceptually integrate evolutionary graph theory with theoretical genetics of structured populations. |
format | Online Article Text |
id | pubmed-6258371 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-62583712018-12-06 Invasion and effective size of graph-structured populations Giaimo, Stefano Arranz, Jordi Traulsen, Arne PLoS Comput Biol Research Article Population structure can strongly affect evolutionary dynamics. The most general way to describe population structures are graphs. An important observable on evolutionary graphs is the probability that a novel mutation spreads through the entire population. But what drives this spread of a mutation towards fixation? Here, we propose a novel way to understand the forces driving fixation by borrowing techniques from evolutionary demography to quantify the invasion fitness and the effective population size for different graphs. Our method is very general and even applies to weighted graphs with node dependent fitness. However, we focus on analytical results for undirected graphs with node independent fitness. The method will allow to conceptually integrate evolutionary graph theory with theoretical genetics of structured populations. Public Library of Science 2018-11-12 /pmc/articles/PMC6258371/ /pubmed/30419017 http://dx.doi.org/10.1371/journal.pcbi.1006559 Text en © 2018 Giaimo et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Giaimo, Stefano Arranz, Jordi Traulsen, Arne Invasion and effective size of graph-structured populations |
title | Invasion and effective size of graph-structured populations |
title_full | Invasion and effective size of graph-structured populations |
title_fullStr | Invasion and effective size of graph-structured populations |
title_full_unstemmed | Invasion and effective size of graph-structured populations |
title_short | Invasion and effective size of graph-structured populations |
title_sort | invasion and effective size of graph-structured populations |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6258371/ https://www.ncbi.nlm.nih.gov/pubmed/30419017 http://dx.doi.org/10.1371/journal.pcbi.1006559 |
work_keys_str_mv | AT giaimostefano invasionandeffectivesizeofgraphstructuredpopulations AT arranzjordi invasionandeffectivesizeofgraphstructuredpopulations AT traulsenarne invasionandeffectivesizeofgraphstructuredpopulations |