High-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium Mucilaginibacter pedocola TBZ30(T)

Mucilaginibacter pedocola TBZ30(T) (= CCTCC AB 2015301(T) = KCTC 42833(T)) is a Gram- negative, rod-shaped, non-motile and non-spore-forming bacterium isolated from a heavy metal contaminated paddy field. It shows resistance to multiple heavy metals and can adsorb/remove Zn(2+) and Cd(2+) during cul...

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Autores principales: Fan, Xia, Tang, Jingwei, Nie, Li, Huang, Jing, Wang, Gejiao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Short Genome Report
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6260751/
https://www.ncbi.nlm.nih.gov/pubmed/30505390
http://dx.doi.org/10.1186/s40793-018-0337-8
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author Fan, Xia
Tang, Jingwei
Nie, Li
Huang, Jing
Wang, Gejiao
author_facet Fan, Xia
Tang, Jingwei
Nie, Li
Huang, Jing
Wang, Gejiao
author_sort Fan, Xia
collection PubMed
description Mucilaginibacter pedocola TBZ30(T) (= CCTCC AB 2015301(T) = KCTC 42833(T)) is a Gram- negative, rod-shaped, non-motile and non-spore-forming bacterium isolated from a heavy metal contaminated paddy field. It shows resistance to multiple heavy metals and can adsorb/remove Zn(2+) and Cd(2+) during cultivation. In addition, strain TBZ30(T) produces exopolysaccharides (EPS). These features make it a great potential to bioremediate heavy metal contamination and biotechnical application. Here we describe the genome sequence and annotation of strain TBZ30(T). The genome size is 7,035,113 bp, contains 3132 protein-coding genes (2736 with predicted functions), 50 tRNA encoding genes and 14 rRNA encoding genes. Putative heavy metal resistant genes and EPS associated genes are found in the genome.
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spelling pubmed-62607512018-11-30 High-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium Mucilaginibacter pedocola TBZ30(T) Fan, Xia Tang, Jingwei Nie, Li Huang, Jing Wang, Gejiao Stand Genomic Sci Short Genome Report Mucilaginibacter pedocola TBZ30(T) (= CCTCC AB 2015301(T) = KCTC 42833(T)) is a Gram- negative, rod-shaped, non-motile and non-spore-forming bacterium isolated from a heavy metal contaminated paddy field. It shows resistance to multiple heavy metals and can adsorb/remove Zn(2+) and Cd(2+) during cultivation. In addition, strain TBZ30(T) produces exopolysaccharides (EPS). These features make it a great potential to bioremediate heavy metal contamination and biotechnical application. Here we describe the genome sequence and annotation of strain TBZ30(T). The genome size is 7,035,113 bp, contains 3132 protein-coding genes (2736 with predicted functions), 50 tRNA encoding genes and 14 rRNA encoding genes. Putative heavy metal resistant genes and EPS associated genes are found in the genome. BioMed Central 2018-11-28 /pmc/articles/PMC6260751/ /pubmed/30505390 http://dx.doi.org/10.1186/s40793-018-0337-8 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Fan, Xia
Tang, Jingwei
Nie, Li
Huang, Jing
Wang, Gejiao
High-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium Mucilaginibacter pedocola TBZ30(T)
title High-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium Mucilaginibacter pedocola TBZ30(T)
title_full High-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium Mucilaginibacter pedocola TBZ30(T)
title_fullStr High-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium Mucilaginibacter pedocola TBZ30(T)
title_full_unstemmed High-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium Mucilaginibacter pedocola TBZ30(T)
title_short High-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium Mucilaginibacter pedocola TBZ30(T)
title_sort high-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium mucilaginibacter pedocola tbz30(t)
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6260751/
https://www.ncbi.nlm.nih.gov/pubmed/30505390
http://dx.doi.org/10.1186/s40793-018-0337-8
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