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Assessment of Stability and Discrimination Capacity of Radiomic Features on Apparent Diffusion Coefficient Images
The objectives of the study are to develop a new way to assess stability and discrimination capacity of radiomic features without the need of test-retest or multiple delineations and to use information obtained to perform a preliminary feature selection. Apparent diffusion coefficient (ADC) maps wer...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6261192/ https://www.ncbi.nlm.nih.gov/pubmed/29725965 http://dx.doi.org/10.1007/s10278-018-0092-9 |
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author | Bologna, Marco Corino, Valentina D. A. Montin, Eros Messina, Antonella Calareso, Giuseppina Greco, Francesca G. Sdao, Silvana Mainardi, Luca T. |
author_facet | Bologna, Marco Corino, Valentina D. A. Montin, Eros Messina, Antonella Calareso, Giuseppina Greco, Francesca G. Sdao, Silvana Mainardi, Luca T. |
author_sort | Bologna, Marco |
collection | PubMed |
description | The objectives of the study are to develop a new way to assess stability and discrimination capacity of radiomic features without the need of test-retest or multiple delineations and to use information obtained to perform a preliminary feature selection. Apparent diffusion coefficient (ADC) maps were computed from diffusion-weighted magnetic resonance images (DW-MRI) of two groups of patients: 18 with soft tissue sarcomas (STS) and 18 with oropharyngeal cancers (OPC). Sixty-nine radiomic features were computed, using three different histogram discretizations (16, 32, and 64 bins). Geometrical transformations (translations) of increasing entity were applied to the regions of interest (ROIs), and the intra-class correlation coefficient (ICC) was used to compare the features computed on the original and modified ROIs. The distribution of ICC values for minimal and maximal entity translations (ICC(10) and ICC(100), respectively) was used to adjust thresholds of ICC (ICC(min) and ICC(max)) used to discriminate between good, unstable (ICC(10) < ICC(min)), and non-discriminative features (ICC(100) > ICC(max)). Fifty-four and 59 radiomic features passed the stability-based selection for all the three histogram discretizations for the OPC and STS datasets, respectively. The excluded features were similar across the different histogram discretizations (Jaccard’s index 0.77 ± 0.13 and 0.9 ± 0.1 for OPC and STS, respectively) but different between datasets (Jaccard’s index 0.19 ± 0.02). The results suggest that the observed radiomic features are mainly stable and discriminative, but the stability depends on the region of the body under observation. The method provides a way to assess stability without the need of test-retest or multiple delineations. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s10278-018-0092-9) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6261192 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-62611922018-12-11 Assessment of Stability and Discrimination Capacity of Radiomic Features on Apparent Diffusion Coefficient Images Bologna, Marco Corino, Valentina D. A. Montin, Eros Messina, Antonella Calareso, Giuseppina Greco, Francesca G. Sdao, Silvana Mainardi, Luca T. J Digit Imaging Article The objectives of the study are to develop a new way to assess stability and discrimination capacity of radiomic features without the need of test-retest or multiple delineations and to use information obtained to perform a preliminary feature selection. Apparent diffusion coefficient (ADC) maps were computed from diffusion-weighted magnetic resonance images (DW-MRI) of two groups of patients: 18 with soft tissue sarcomas (STS) and 18 with oropharyngeal cancers (OPC). Sixty-nine radiomic features were computed, using three different histogram discretizations (16, 32, and 64 bins). Geometrical transformations (translations) of increasing entity were applied to the regions of interest (ROIs), and the intra-class correlation coefficient (ICC) was used to compare the features computed on the original and modified ROIs. The distribution of ICC values for minimal and maximal entity translations (ICC(10) and ICC(100), respectively) was used to adjust thresholds of ICC (ICC(min) and ICC(max)) used to discriminate between good, unstable (ICC(10) < ICC(min)), and non-discriminative features (ICC(100) > ICC(max)). Fifty-four and 59 radiomic features passed the stability-based selection for all the three histogram discretizations for the OPC and STS datasets, respectively. The excluded features were similar across the different histogram discretizations (Jaccard’s index 0.77 ± 0.13 and 0.9 ± 0.1 for OPC and STS, respectively) but different between datasets (Jaccard’s index 0.19 ± 0.02). The results suggest that the observed radiomic features are mainly stable and discriminative, but the stability depends on the region of the body under observation. The method provides a way to assess stability without the need of test-retest or multiple delineations. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s10278-018-0092-9) contains supplementary material, which is available to authorized users. Springer International Publishing 2018-05-03 2018-12 /pmc/articles/PMC6261192/ /pubmed/29725965 http://dx.doi.org/10.1007/s10278-018-0092-9 Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Bologna, Marco Corino, Valentina D. A. Montin, Eros Messina, Antonella Calareso, Giuseppina Greco, Francesca G. Sdao, Silvana Mainardi, Luca T. Assessment of Stability and Discrimination Capacity of Radiomic Features on Apparent Diffusion Coefficient Images |
title | Assessment of Stability and Discrimination Capacity of Radiomic Features on Apparent Diffusion Coefficient Images |
title_full | Assessment of Stability and Discrimination Capacity of Radiomic Features on Apparent Diffusion Coefficient Images |
title_fullStr | Assessment of Stability and Discrimination Capacity of Radiomic Features on Apparent Diffusion Coefficient Images |
title_full_unstemmed | Assessment of Stability and Discrimination Capacity of Radiomic Features on Apparent Diffusion Coefficient Images |
title_short | Assessment of Stability and Discrimination Capacity of Radiomic Features on Apparent Diffusion Coefficient Images |
title_sort | assessment of stability and discrimination capacity of radiomic features on apparent diffusion coefficient images |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6261192/ https://www.ncbi.nlm.nih.gov/pubmed/29725965 http://dx.doi.org/10.1007/s10278-018-0092-9 |
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