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A deep learning approach to automatic detection of early glaucoma from visual fields
PURPOSE: To investigate the suitability of multi-scale spatial information in 30(o) visual fields (VF), computed from a Convolutional Neural Network (CNN) classifier, for early-glaucoma vs. control discrimination. METHOD: Two data sets of VFs acquired with the OCTOPUS 101 G1 program and the Humphrey...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6261540/ https://www.ncbi.nlm.nih.gov/pubmed/30485270 http://dx.doi.org/10.1371/journal.pone.0206081 |
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author | Kucur, Şerife Seda Holló, Gábor Sznitman, Raphael |
author_facet | Kucur, Şerife Seda Holló, Gábor Sznitman, Raphael |
author_sort | Kucur, Şerife Seda |
collection | PubMed |
description | PURPOSE: To investigate the suitability of multi-scale spatial information in 30(o) visual fields (VF), computed from a Convolutional Neural Network (CNN) classifier, for early-glaucoma vs. control discrimination. METHOD: Two data sets of VFs acquired with the OCTOPUS 101 G1 program and the Humphrey Field Analyzer 24–2 pattern were subdivided into control and early-glaucomatous groups, and converted into a new image using a novel voronoi representation to train a custom-designed CNN so to discriminate between control and early-glaucomatous eyes. Saliency maps that highlight what regions of the VF are contributing maximally to the classification decision were computed to provide classification justification. Model fitting was cross-validated and average precision (AP) score performances were computed for our method, Mean Defect (MD), square-root of Loss Variance (sLV), their combination (MD+sLV), and a Neural Network (NN) that does not use convolutional features. RESULTS: CNN achieved the best AP score (0.874±0.095) across all test folds for one data set compared to others (MD = 0.869±0.064, sLV = 0.775±0.137, MD+sLV = 0.839±0.085, NN = 0.843±0.089) and the third best AP score (0.986 ±0.019) on the other one with slight difference from the other methods (MD = 0.986±0.023, sLV = 0.992±0.016, MD+sLV = 0.987±0.017, NN = 0.985±0.017). In general, CNN consistently led to high AP across different data sets. Qualitatively, computed saliency maps appeared to provide clinically relevant information on the CNN decision for individual VFs. CONCLUSION: The proposed CNN offers high classification performance for the discrimination of control and early-glaucoma VFs when compared with standard clinical decision measures. The CNN classification, aided by saliency visualization, may support clinicians in the automatic discrimination of early-glaucomatous and normal VFs. |
format | Online Article Text |
id | pubmed-6261540 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-62615402018-12-19 A deep learning approach to automatic detection of early glaucoma from visual fields Kucur, Şerife Seda Holló, Gábor Sznitman, Raphael PLoS One Research Article PURPOSE: To investigate the suitability of multi-scale spatial information in 30(o) visual fields (VF), computed from a Convolutional Neural Network (CNN) classifier, for early-glaucoma vs. control discrimination. METHOD: Two data sets of VFs acquired with the OCTOPUS 101 G1 program and the Humphrey Field Analyzer 24–2 pattern were subdivided into control and early-glaucomatous groups, and converted into a new image using a novel voronoi representation to train a custom-designed CNN so to discriminate between control and early-glaucomatous eyes. Saliency maps that highlight what regions of the VF are contributing maximally to the classification decision were computed to provide classification justification. Model fitting was cross-validated and average precision (AP) score performances were computed for our method, Mean Defect (MD), square-root of Loss Variance (sLV), their combination (MD+sLV), and a Neural Network (NN) that does not use convolutional features. RESULTS: CNN achieved the best AP score (0.874±0.095) across all test folds for one data set compared to others (MD = 0.869±0.064, sLV = 0.775±0.137, MD+sLV = 0.839±0.085, NN = 0.843±0.089) and the third best AP score (0.986 ±0.019) on the other one with slight difference from the other methods (MD = 0.986±0.023, sLV = 0.992±0.016, MD+sLV = 0.987±0.017, NN = 0.985±0.017). In general, CNN consistently led to high AP across different data sets. Qualitatively, computed saliency maps appeared to provide clinically relevant information on the CNN decision for individual VFs. CONCLUSION: The proposed CNN offers high classification performance for the discrimination of control and early-glaucoma VFs when compared with standard clinical decision measures. The CNN classification, aided by saliency visualization, may support clinicians in the automatic discrimination of early-glaucomatous and normal VFs. Public Library of Science 2018-11-28 /pmc/articles/PMC6261540/ /pubmed/30485270 http://dx.doi.org/10.1371/journal.pone.0206081 Text en © 2018 Kucur et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Kucur, Şerife Seda Holló, Gábor Sznitman, Raphael A deep learning approach to automatic detection of early glaucoma from visual fields |
title | A deep learning approach to automatic detection of early glaucoma from visual fields |
title_full | A deep learning approach to automatic detection of early glaucoma from visual fields |
title_fullStr | A deep learning approach to automatic detection of early glaucoma from visual fields |
title_full_unstemmed | A deep learning approach to automatic detection of early glaucoma from visual fields |
title_short | A deep learning approach to automatic detection of early glaucoma from visual fields |
title_sort | deep learning approach to automatic detection of early glaucoma from visual fields |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6261540/ https://www.ncbi.nlm.nih.gov/pubmed/30485270 http://dx.doi.org/10.1371/journal.pone.0206081 |
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