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Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma

The EGFR gene was one of the first molecules to be selected for targeted gene therapy. EGFR-mutated lung adenocarcinoma, which is responsive to EGFR inhibitors, is characterized by a distinct oncogenic pathway in which unique microRNA (miRNA)–mRNA interactions have been observed. However, little inf...

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Autores principales: Subat, Sophia, Inamura, Kentaro, Ninomiya, Hironori, Nagano, Hiroko, Okumura, Sakae, Ishikawa, Yuichi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6262391/
https://www.ncbi.nlm.nih.gov/pubmed/30404194
http://dx.doi.org/10.3390/jcm7110419
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author Subat, Sophia
Inamura, Kentaro
Ninomiya, Hironori
Nagano, Hiroko
Okumura, Sakae
Ishikawa, Yuichi
author_facet Subat, Sophia
Inamura, Kentaro
Ninomiya, Hironori
Nagano, Hiroko
Okumura, Sakae
Ishikawa, Yuichi
author_sort Subat, Sophia
collection PubMed
description The EGFR gene was one of the first molecules to be selected for targeted gene therapy. EGFR-mutated lung adenocarcinoma, which is responsive to EGFR inhibitors, is characterized by a distinct oncogenic pathway in which unique microRNA (miRNA)–mRNA interactions have been observed. However, little information is available about the miRNA–mRNA regulatory network involved. Both miRNA and mRNA expression profiles were investigated using microarrays in 155 surgically resected specimens of lung adenocarcinoma with a known EGFR mutation status (52 mutated and 103 wild-type cases). An integrative analysis of the data was performed to identify the unique miRNA–mRNA regulatory network in EGFR-mutated lung adenocarcinoma. Expression profiling of miRNAs and mRNAs yielded characteristic miRNA/mRNA signatures (19 miRNAs/431 mRNAs) in EGFR-mutated lung adenocarcinoma. Five of the 19 miRNAs were previously listed as EGFR-mutation-specific miRNAs (i.e., miR-532-3p, miR-500a-3p, miR-224-5p, miR-502-3p, and miR-532-5p). An integrative analysis of miRNA and mRNA expression revealed a refined list of putative miRNA–mRNA interactions, of which 63 were potentially involved in EGFR-mutated tumors. Network structural analysis provided a comprehensive view of the complex miRNA–mRNA interactions in EGFR-mutated lung adenocarcinoma, including DUSP4 and MUC4 axes. Overall, this observational study provides insight into the unique miRNA–mRNA regulatory network present in EGFR-mutated tumors. Our findings, if validated, would inform future research examining the interplay of miRNAs and mRNAs in EGFR-mutated lung adenocarcinoma.
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spelling pubmed-62623912018-12-03 Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma Subat, Sophia Inamura, Kentaro Ninomiya, Hironori Nagano, Hiroko Okumura, Sakae Ishikawa, Yuichi J Clin Med Article The EGFR gene was one of the first molecules to be selected for targeted gene therapy. EGFR-mutated lung adenocarcinoma, which is responsive to EGFR inhibitors, is characterized by a distinct oncogenic pathway in which unique microRNA (miRNA)–mRNA interactions have been observed. However, little information is available about the miRNA–mRNA regulatory network involved. Both miRNA and mRNA expression profiles were investigated using microarrays in 155 surgically resected specimens of lung adenocarcinoma with a known EGFR mutation status (52 mutated and 103 wild-type cases). An integrative analysis of the data was performed to identify the unique miRNA–mRNA regulatory network in EGFR-mutated lung adenocarcinoma. Expression profiling of miRNAs and mRNAs yielded characteristic miRNA/mRNA signatures (19 miRNAs/431 mRNAs) in EGFR-mutated lung adenocarcinoma. Five of the 19 miRNAs were previously listed as EGFR-mutation-specific miRNAs (i.e., miR-532-3p, miR-500a-3p, miR-224-5p, miR-502-3p, and miR-532-5p). An integrative analysis of miRNA and mRNA expression revealed a refined list of putative miRNA–mRNA interactions, of which 63 were potentially involved in EGFR-mutated tumors. Network structural analysis provided a comprehensive view of the complex miRNA–mRNA interactions in EGFR-mutated lung adenocarcinoma, including DUSP4 and MUC4 axes. Overall, this observational study provides insight into the unique miRNA–mRNA regulatory network present in EGFR-mutated tumors. Our findings, if validated, would inform future research examining the interplay of miRNAs and mRNAs in EGFR-mutated lung adenocarcinoma. MDPI 2018-11-06 /pmc/articles/PMC6262391/ /pubmed/30404194 http://dx.doi.org/10.3390/jcm7110419 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Subat, Sophia
Inamura, Kentaro
Ninomiya, Hironori
Nagano, Hiroko
Okumura, Sakae
Ishikawa, Yuichi
Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma
title Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma
title_full Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma
title_fullStr Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma
title_full_unstemmed Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma
title_short Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma
title_sort unique microrna and mrna interactions in egfr-mutated lung adenocarcinoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6262391/
https://www.ncbi.nlm.nih.gov/pubmed/30404194
http://dx.doi.org/10.3390/jcm7110419
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