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Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma
The EGFR gene was one of the first molecules to be selected for targeted gene therapy. EGFR-mutated lung adenocarcinoma, which is responsive to EGFR inhibitors, is characterized by a distinct oncogenic pathway in which unique microRNA (miRNA)–mRNA interactions have been observed. However, little inf...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6262391/ https://www.ncbi.nlm.nih.gov/pubmed/30404194 http://dx.doi.org/10.3390/jcm7110419 |
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author | Subat, Sophia Inamura, Kentaro Ninomiya, Hironori Nagano, Hiroko Okumura, Sakae Ishikawa, Yuichi |
author_facet | Subat, Sophia Inamura, Kentaro Ninomiya, Hironori Nagano, Hiroko Okumura, Sakae Ishikawa, Yuichi |
author_sort | Subat, Sophia |
collection | PubMed |
description | The EGFR gene was one of the first molecules to be selected for targeted gene therapy. EGFR-mutated lung adenocarcinoma, which is responsive to EGFR inhibitors, is characterized by a distinct oncogenic pathway in which unique microRNA (miRNA)–mRNA interactions have been observed. However, little information is available about the miRNA–mRNA regulatory network involved. Both miRNA and mRNA expression profiles were investigated using microarrays in 155 surgically resected specimens of lung adenocarcinoma with a known EGFR mutation status (52 mutated and 103 wild-type cases). An integrative analysis of the data was performed to identify the unique miRNA–mRNA regulatory network in EGFR-mutated lung adenocarcinoma. Expression profiling of miRNAs and mRNAs yielded characteristic miRNA/mRNA signatures (19 miRNAs/431 mRNAs) in EGFR-mutated lung adenocarcinoma. Five of the 19 miRNAs were previously listed as EGFR-mutation-specific miRNAs (i.e., miR-532-3p, miR-500a-3p, miR-224-5p, miR-502-3p, and miR-532-5p). An integrative analysis of miRNA and mRNA expression revealed a refined list of putative miRNA–mRNA interactions, of which 63 were potentially involved in EGFR-mutated tumors. Network structural analysis provided a comprehensive view of the complex miRNA–mRNA interactions in EGFR-mutated lung adenocarcinoma, including DUSP4 and MUC4 axes. Overall, this observational study provides insight into the unique miRNA–mRNA regulatory network present in EGFR-mutated tumors. Our findings, if validated, would inform future research examining the interplay of miRNAs and mRNAs in EGFR-mutated lung adenocarcinoma. |
format | Online Article Text |
id | pubmed-6262391 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-62623912018-12-03 Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma Subat, Sophia Inamura, Kentaro Ninomiya, Hironori Nagano, Hiroko Okumura, Sakae Ishikawa, Yuichi J Clin Med Article The EGFR gene was one of the first molecules to be selected for targeted gene therapy. EGFR-mutated lung adenocarcinoma, which is responsive to EGFR inhibitors, is characterized by a distinct oncogenic pathway in which unique microRNA (miRNA)–mRNA interactions have been observed. However, little information is available about the miRNA–mRNA regulatory network involved. Both miRNA and mRNA expression profiles were investigated using microarrays in 155 surgically resected specimens of lung adenocarcinoma with a known EGFR mutation status (52 mutated and 103 wild-type cases). An integrative analysis of the data was performed to identify the unique miRNA–mRNA regulatory network in EGFR-mutated lung adenocarcinoma. Expression profiling of miRNAs and mRNAs yielded characteristic miRNA/mRNA signatures (19 miRNAs/431 mRNAs) in EGFR-mutated lung adenocarcinoma. Five of the 19 miRNAs were previously listed as EGFR-mutation-specific miRNAs (i.e., miR-532-3p, miR-500a-3p, miR-224-5p, miR-502-3p, and miR-532-5p). An integrative analysis of miRNA and mRNA expression revealed a refined list of putative miRNA–mRNA interactions, of which 63 were potentially involved in EGFR-mutated tumors. Network structural analysis provided a comprehensive view of the complex miRNA–mRNA interactions in EGFR-mutated lung adenocarcinoma, including DUSP4 and MUC4 axes. Overall, this observational study provides insight into the unique miRNA–mRNA regulatory network present in EGFR-mutated tumors. Our findings, if validated, would inform future research examining the interplay of miRNAs and mRNAs in EGFR-mutated lung adenocarcinoma. MDPI 2018-11-06 /pmc/articles/PMC6262391/ /pubmed/30404194 http://dx.doi.org/10.3390/jcm7110419 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Subat, Sophia Inamura, Kentaro Ninomiya, Hironori Nagano, Hiroko Okumura, Sakae Ishikawa, Yuichi Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma |
title | Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma |
title_full | Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma |
title_fullStr | Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma |
title_full_unstemmed | Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma |
title_short | Unique MicroRNA and mRNA Interactions in EGFR-Mutated Lung Adenocarcinoma |
title_sort | unique microrna and mrna interactions in egfr-mutated lung adenocarcinoma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6262391/ https://www.ncbi.nlm.nih.gov/pubmed/30404194 http://dx.doi.org/10.3390/jcm7110419 |
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