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A quantitative model of nitrogen fixation in the presence of ammonium
Nitrogen fixation provides bioavailable nitrogen, supporting global ecosystems and influencing global cycles of other elements. It provides an additional source of nitrogen to organisms at a cost of lower growth efficiency, largely due to respiratory control of intra-cellular oxygen. Nitrogen-fixing...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6264846/ https://www.ncbi.nlm.nih.gov/pubmed/30496286 http://dx.doi.org/10.1371/journal.pone.0208282 |
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author | Inomura, Keisuke Bragg, Jason Riemann, Lasse Follows, Michael J. |
author_facet | Inomura, Keisuke Bragg, Jason Riemann, Lasse Follows, Michael J. |
author_sort | Inomura, Keisuke |
collection | PubMed |
description | Nitrogen fixation provides bioavailable nitrogen, supporting global ecosystems and influencing global cycles of other elements. It provides an additional source of nitrogen to organisms at a cost of lower growth efficiency, largely due to respiratory control of intra-cellular oxygen. Nitrogen-fixing bacteria can, however, utilize both dinitrogen gas and fixed nitrogen, decreasing energetic costs. Here we present an idealized metabolic model of the heterotrophic nitrogen fixer Azotobacter vinelandii which, constrained by laboratory data, provides quantitative predictions for conditions under which the organism uses either ammonium or nitrogen fixation, or both, as a function of the relative supply rates of carbohydrate, fixed nitrogen as well as the ambient oxygen concentration. The model reveals that the organism respires carbohydrate in excess of energetic requirements even when nitrogen fixation is inhibited and respiratory protection is not essential. The use of multiple nitrogen source expands the potential niche and range for nitrogen fixation. The model provides a quantitative framework which can be employed in ecosystem and biogeochemistry models. |
format | Online Article Text |
id | pubmed-6264846 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-62648462018-12-19 A quantitative model of nitrogen fixation in the presence of ammonium Inomura, Keisuke Bragg, Jason Riemann, Lasse Follows, Michael J. PLoS One Research Article Nitrogen fixation provides bioavailable nitrogen, supporting global ecosystems and influencing global cycles of other elements. It provides an additional source of nitrogen to organisms at a cost of lower growth efficiency, largely due to respiratory control of intra-cellular oxygen. Nitrogen-fixing bacteria can, however, utilize both dinitrogen gas and fixed nitrogen, decreasing energetic costs. Here we present an idealized metabolic model of the heterotrophic nitrogen fixer Azotobacter vinelandii which, constrained by laboratory data, provides quantitative predictions for conditions under which the organism uses either ammonium or nitrogen fixation, or both, as a function of the relative supply rates of carbohydrate, fixed nitrogen as well as the ambient oxygen concentration. The model reveals that the organism respires carbohydrate in excess of energetic requirements even when nitrogen fixation is inhibited and respiratory protection is not essential. The use of multiple nitrogen source expands the potential niche and range for nitrogen fixation. The model provides a quantitative framework which can be employed in ecosystem and biogeochemistry models. Public Library of Science 2018-11-29 /pmc/articles/PMC6264846/ /pubmed/30496286 http://dx.doi.org/10.1371/journal.pone.0208282 Text en © 2018 Inomura et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Inomura, Keisuke Bragg, Jason Riemann, Lasse Follows, Michael J. A quantitative model of nitrogen fixation in the presence of ammonium |
title | A quantitative model of nitrogen fixation in the presence of ammonium |
title_full | A quantitative model of nitrogen fixation in the presence of ammonium |
title_fullStr | A quantitative model of nitrogen fixation in the presence of ammonium |
title_full_unstemmed | A quantitative model of nitrogen fixation in the presence of ammonium |
title_short | A quantitative model of nitrogen fixation in the presence of ammonium |
title_sort | quantitative model of nitrogen fixation in the presence of ammonium |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6264846/ https://www.ncbi.nlm.nih.gov/pubmed/30496286 http://dx.doi.org/10.1371/journal.pone.0208282 |
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