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Protein targets of thiazolidinone derivatives in Toxoplasma gondii and insights into their binding to ROP18
BACKGROUND: Thiazolidinone derivatives show inhibitory activity (IC(50)) against the Toxoplasma gondii parasite, as well as high selectivity with high therapeutic index. To disclose the target proteins of the thiazolidinone core in this parasite, we explored in silico the active sites of different T...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6267824/ https://www.ncbi.nlm.nih.gov/pubmed/30497375 http://dx.doi.org/10.1186/s12864-018-5223-7 |
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author | Molina, Diego Cossio-Pérez, Rodrigo Rocha-Roa, Cristian Pedraza, Lina Cortes, Edwar Hernández, Alejandro Gómez-Marín, Jorge E. |
author_facet | Molina, Diego Cossio-Pérez, Rodrigo Rocha-Roa, Cristian Pedraza, Lina Cortes, Edwar Hernández, Alejandro Gómez-Marín, Jorge E. |
author_sort | Molina, Diego |
collection | PubMed |
description | BACKGROUND: Thiazolidinone derivatives show inhibitory activity (IC(50)) against the Toxoplasma gondii parasite, as well as high selectivity with high therapeutic index. To disclose the target proteins of the thiazolidinone core in this parasite, we explored in silico the active sites of different T. gondii proteins and estimated the binding-free energy of reported thiazolidinone molecules with inhibitory effect on invasion and replication of the parasite inside host cells. This enabled us to describe some of the most suitable structural characteristics to design a compound derived from the thiazolidinone core. RESULTS: The best binding affinity was observed in the active site of kinase proteins, we selected the active site of the T. gondii ROP18 kinase, because it is an important factor for the virulence and survival of the parasite. We present the possible effect of a derivative of thiazolidinone core in the active site of T. gondii ROP18 and described some characteristics of substituent groups that could improve the affinity and specificity of compounds derived from the thiazolidinone core against T. gondii. CONCLUSIONS: The results of our study suggest that compounds derived from the thiazolidinone core have a preference for protein kinases of T. gondii, being promising compounds for the development of new drugs with potential anti-toxoplasmosis activity. Our findings highlight the importance of use computational studies for the understanding of the action mechanism of compounds with biological activity. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12864-018-5223-7) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6267824 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-62678242018-12-05 Protein targets of thiazolidinone derivatives in Toxoplasma gondii and insights into their binding to ROP18 Molina, Diego Cossio-Pérez, Rodrigo Rocha-Roa, Cristian Pedraza, Lina Cortes, Edwar Hernández, Alejandro Gómez-Marín, Jorge E. BMC Genomics Research Article BACKGROUND: Thiazolidinone derivatives show inhibitory activity (IC(50)) against the Toxoplasma gondii parasite, as well as high selectivity with high therapeutic index. To disclose the target proteins of the thiazolidinone core in this parasite, we explored in silico the active sites of different T. gondii proteins and estimated the binding-free energy of reported thiazolidinone molecules with inhibitory effect on invasion and replication of the parasite inside host cells. This enabled us to describe some of the most suitable structural characteristics to design a compound derived from the thiazolidinone core. RESULTS: The best binding affinity was observed in the active site of kinase proteins, we selected the active site of the T. gondii ROP18 kinase, because it is an important factor for the virulence and survival of the parasite. We present the possible effect of a derivative of thiazolidinone core in the active site of T. gondii ROP18 and described some characteristics of substituent groups that could improve the affinity and specificity of compounds derived from the thiazolidinone core against T. gondii. CONCLUSIONS: The results of our study suggest that compounds derived from the thiazolidinone core have a preference for protein kinases of T. gondii, being promising compounds for the development of new drugs with potential anti-toxoplasmosis activity. Our findings highlight the importance of use computational studies for the understanding of the action mechanism of compounds with biological activity. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12864-018-5223-7) contains supplementary material, which is available to authorized users. BioMed Central 2018-11-29 /pmc/articles/PMC6267824/ /pubmed/30497375 http://dx.doi.org/10.1186/s12864-018-5223-7 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Molina, Diego Cossio-Pérez, Rodrigo Rocha-Roa, Cristian Pedraza, Lina Cortes, Edwar Hernández, Alejandro Gómez-Marín, Jorge E. Protein targets of thiazolidinone derivatives in Toxoplasma gondii and insights into their binding to ROP18 |
title | Protein targets of thiazolidinone derivatives in Toxoplasma gondii and insights into their binding to ROP18 |
title_full | Protein targets of thiazolidinone derivatives in Toxoplasma gondii and insights into their binding to ROP18 |
title_fullStr | Protein targets of thiazolidinone derivatives in Toxoplasma gondii and insights into their binding to ROP18 |
title_full_unstemmed | Protein targets of thiazolidinone derivatives in Toxoplasma gondii and insights into their binding to ROP18 |
title_short | Protein targets of thiazolidinone derivatives in Toxoplasma gondii and insights into their binding to ROP18 |
title_sort | protein targets of thiazolidinone derivatives in toxoplasma gondii and insights into their binding to rop18 |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6267824/ https://www.ncbi.nlm.nih.gov/pubmed/30497375 http://dx.doi.org/10.1186/s12864-018-5223-7 |
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