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Proteomics of the wheat tan spot pathogen Pyrenophora tritici-repentis
OBJECTIVES: The fungus Pyrenophora tritici-repentis is a major pathogen of wheat worldwide, causing the leaf spotting disease tan spot. To best inform approaches for plant genetic resistance, an understanding of the biology and pathogenicity mechanisms of this fungal pathogen is essential. Here, int...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6267847/ https://www.ncbi.nlm.nih.gov/pubmed/30497514 http://dx.doi.org/10.1186/s13104-018-3936-y |
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author | Moffat, Caroline S. Stoll, Thomas Moolhuijzen, Paula |
author_facet | Moffat, Caroline S. Stoll, Thomas Moolhuijzen, Paula |
author_sort | Moffat, Caroline S. |
collection | PubMed |
description | OBJECTIVES: The fungus Pyrenophora tritici-repentis is a major pathogen of wheat worldwide, causing the leaf spotting disease tan spot. To best inform approaches for plant genetic resistance, an understanding of the biology and pathogenicity mechanisms of this fungal pathogen is essential. Here, intracellular and extracellular proteins of P. tritici-repentis were extracted, and peptides analysed via high-resolution mass spectrometry. Our objective was to generate a useful proteomics resource for P. tritici-repentis. A survey of proteins secreted by the pathogen into culture filtrate is especially useful, as these are likely to come in direct contact with the wheat host and may play important roles in infection/pathogenicity. The peptide data presented herein, has also been used to successfully verify and refine in silico predicted P. tritici-repentis gene annotations, through the validation of alternative splicing and reading frame shifts. DATA DESCRIPTION: The data sets presented consist of peptide spectra of the extracellular and intracellular proteomes of three P. tritici-repentis isolates. Peptide matches to translated transcripts of the North American reference isolate Pt-1C-BFP are also provided. |
format | Online Article Text |
id | pubmed-6267847 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-62678472018-12-05 Proteomics of the wheat tan spot pathogen Pyrenophora tritici-repentis Moffat, Caroline S. Stoll, Thomas Moolhuijzen, Paula BMC Res Notes Data Note OBJECTIVES: The fungus Pyrenophora tritici-repentis is a major pathogen of wheat worldwide, causing the leaf spotting disease tan spot. To best inform approaches for plant genetic resistance, an understanding of the biology and pathogenicity mechanisms of this fungal pathogen is essential. Here, intracellular and extracellular proteins of P. tritici-repentis were extracted, and peptides analysed via high-resolution mass spectrometry. Our objective was to generate a useful proteomics resource for P. tritici-repentis. A survey of proteins secreted by the pathogen into culture filtrate is especially useful, as these are likely to come in direct contact with the wheat host and may play important roles in infection/pathogenicity. The peptide data presented herein, has also been used to successfully verify and refine in silico predicted P. tritici-repentis gene annotations, through the validation of alternative splicing and reading frame shifts. DATA DESCRIPTION: The data sets presented consist of peptide spectra of the extracellular and intracellular proteomes of three P. tritici-repentis isolates. Peptide matches to translated transcripts of the North American reference isolate Pt-1C-BFP are also provided. BioMed Central 2018-11-29 /pmc/articles/PMC6267847/ /pubmed/30497514 http://dx.doi.org/10.1186/s13104-018-3936-y Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Data Note Moffat, Caroline S. Stoll, Thomas Moolhuijzen, Paula Proteomics of the wheat tan spot pathogen Pyrenophora tritici-repentis |
title | Proteomics of the wheat tan spot pathogen Pyrenophora tritici-repentis |
title_full | Proteomics of the wheat tan spot pathogen Pyrenophora tritici-repentis |
title_fullStr | Proteomics of the wheat tan spot pathogen Pyrenophora tritici-repentis |
title_full_unstemmed | Proteomics of the wheat tan spot pathogen Pyrenophora tritici-repentis |
title_short | Proteomics of the wheat tan spot pathogen Pyrenophora tritici-repentis |
title_sort | proteomics of the wheat tan spot pathogen pyrenophora tritici-repentis |
topic | Data Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6267847/ https://www.ncbi.nlm.nih.gov/pubmed/30497514 http://dx.doi.org/10.1186/s13104-018-3936-y |
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