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Incorporating Breast Anatomy in Computational Phenotyping of Mammographic Parenchymal Patterns for Breast Cancer Risk Estimation
We retrospectively analyzed negative screening digital mammograms from 115 women who developed unilateral breast cancer at least one year later and 460 matched controls. Texture features were estimated in multiple breast regions defined by an anatomically-oriented polar grid, and were weighted by th...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6269457/ https://www.ncbi.nlm.nih.gov/pubmed/30504841 http://dx.doi.org/10.1038/s41598-018-35929-9 |
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author | Gastounioti, Aimilia Hsieh, Meng-Kang Cohen, Eric Pantalone, Lauren Conant, Emily F. Kontos, Despina |
author_facet | Gastounioti, Aimilia Hsieh, Meng-Kang Cohen, Eric Pantalone, Lauren Conant, Emily F. Kontos, Despina |
author_sort | Gastounioti, Aimilia |
collection | PubMed |
description | We retrospectively analyzed negative screening digital mammograms from 115 women who developed unilateral breast cancer at least one year later and 460 matched controls. Texture features were estimated in multiple breast regions defined by an anatomically-oriented polar grid, and were weighted by their position and underlying dense versus fatty tissue composition. Elastic net regression with cross-validation was performed and area under the curve (AUC) of the receiver operating characteristic (ROC) was used to evaluate ability to predict breast cancer. We also compared our anatomy-augmented features to current state-of-the-art in which parenchymal texture was assessed without considering breast anatomy and evaluated the added value of the extracted features to breast density, body-mass-index (BMI) and age as baseline predictors. Our anatomy-augmented texture features resulted in higher discriminatory capacity (AUC = 0.63 vs. AUC = 0.59) when breast anatomy was not considered (p = 0.021), with dense tissue regions and the central breast quadrant being more heavily weighted. Texture also improved baseline models (from AUC = 0.62 to AUC = 0.67, p = 0.029). Our findings suggest that incorporating breast anatomy information could augment imaging markers of breast cancer risk with the potential to improve personalized breast cancer risk assessment. |
format | Online Article Text |
id | pubmed-6269457 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-62694572018-12-04 Incorporating Breast Anatomy in Computational Phenotyping of Mammographic Parenchymal Patterns for Breast Cancer Risk Estimation Gastounioti, Aimilia Hsieh, Meng-Kang Cohen, Eric Pantalone, Lauren Conant, Emily F. Kontos, Despina Sci Rep Article We retrospectively analyzed negative screening digital mammograms from 115 women who developed unilateral breast cancer at least one year later and 460 matched controls. Texture features were estimated in multiple breast regions defined by an anatomically-oriented polar grid, and were weighted by their position and underlying dense versus fatty tissue composition. Elastic net regression with cross-validation was performed and area under the curve (AUC) of the receiver operating characteristic (ROC) was used to evaluate ability to predict breast cancer. We also compared our anatomy-augmented features to current state-of-the-art in which parenchymal texture was assessed without considering breast anatomy and evaluated the added value of the extracted features to breast density, body-mass-index (BMI) and age as baseline predictors. Our anatomy-augmented texture features resulted in higher discriminatory capacity (AUC = 0.63 vs. AUC = 0.59) when breast anatomy was not considered (p = 0.021), with dense tissue regions and the central breast quadrant being more heavily weighted. Texture also improved baseline models (from AUC = 0.62 to AUC = 0.67, p = 0.029). Our findings suggest that incorporating breast anatomy information could augment imaging markers of breast cancer risk with the potential to improve personalized breast cancer risk assessment. Nature Publishing Group UK 2018-11-30 /pmc/articles/PMC6269457/ /pubmed/30504841 http://dx.doi.org/10.1038/s41598-018-35929-9 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Gastounioti, Aimilia Hsieh, Meng-Kang Cohen, Eric Pantalone, Lauren Conant, Emily F. Kontos, Despina Incorporating Breast Anatomy in Computational Phenotyping of Mammographic Parenchymal Patterns for Breast Cancer Risk Estimation |
title | Incorporating Breast Anatomy in Computational Phenotyping of Mammographic Parenchymal Patterns for Breast Cancer Risk Estimation |
title_full | Incorporating Breast Anatomy in Computational Phenotyping of Mammographic Parenchymal Patterns for Breast Cancer Risk Estimation |
title_fullStr | Incorporating Breast Anatomy in Computational Phenotyping of Mammographic Parenchymal Patterns for Breast Cancer Risk Estimation |
title_full_unstemmed | Incorporating Breast Anatomy in Computational Phenotyping of Mammographic Parenchymal Patterns for Breast Cancer Risk Estimation |
title_short | Incorporating Breast Anatomy in Computational Phenotyping of Mammographic Parenchymal Patterns for Breast Cancer Risk Estimation |
title_sort | incorporating breast anatomy in computational phenotyping of mammographic parenchymal patterns for breast cancer risk estimation |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6269457/ https://www.ncbi.nlm.nih.gov/pubmed/30504841 http://dx.doi.org/10.1038/s41598-018-35929-9 |
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