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Dynamic Motion and Rearranged Molecular Shape of Heme in Myoglobin: Structural and Functional Consequences

Myoglobin, a simple oxygen binding protein, was reconstituted with various types of synthetic hemes to manipulate the heme-globin interactions. From the paramagnetic NMR analysis, small heme was found to rotate rapidly about the iron-histidine bond upon. This is a novel and typical example for the f...

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Autor principal: Neya, Saburo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6269712/
https://www.ncbi.nlm.nih.gov/pubmed/23478515
http://dx.doi.org/10.3390/molecules18033168
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author Neya, Saburo
author_facet Neya, Saburo
author_sort Neya, Saburo
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description Myoglobin, a simple oxygen binding protein, was reconstituted with various types of synthetic hemes to manipulate the heme-globin interactions. From the paramagnetic NMR analysis, small heme was found to rotate rapidly about the iron-histidine bond upon. This is a novel and typical example for the fluctuation of protein. The dynamic NMR analysis indicated that the 360° rotational rate of a small heme was 1,400 s(−1) at room temperature. The X-ray analyses revealed that the tertiary structure of globin containing the smallest heme was closely similar to that of native protein despite extensive destruction of the specific heme-globin interactions. The functional analyses of O(2) binding showed that the loose heme-globin contacts do not significantly affect the oxygen binding. On the other hand, the rearrangement of tetrapyrrole array and the non-planar deformation in porphyrin ring significantly affect the functional properties of myoglobin. These results, taken together, indicate that the essential factors to regulate the myoglobin function are hidden under the molecular shape of prosthetic group rather than in the nonbonded heme-globin contacts.
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spelling pubmed-62697122018-12-20 Dynamic Motion and Rearranged Molecular Shape of Heme in Myoglobin: Structural and Functional Consequences Neya, Saburo Molecules Review Myoglobin, a simple oxygen binding protein, was reconstituted with various types of synthetic hemes to manipulate the heme-globin interactions. From the paramagnetic NMR analysis, small heme was found to rotate rapidly about the iron-histidine bond upon. This is a novel and typical example for the fluctuation of protein. The dynamic NMR analysis indicated that the 360° rotational rate of a small heme was 1,400 s(−1) at room temperature. The X-ray analyses revealed that the tertiary structure of globin containing the smallest heme was closely similar to that of native protein despite extensive destruction of the specific heme-globin interactions. The functional analyses of O(2) binding showed that the loose heme-globin contacts do not significantly affect the oxygen binding. On the other hand, the rearrangement of tetrapyrrole array and the non-planar deformation in porphyrin ring significantly affect the functional properties of myoglobin. These results, taken together, indicate that the essential factors to regulate the myoglobin function are hidden under the molecular shape of prosthetic group rather than in the nonbonded heme-globin contacts. MDPI 2013-03-11 /pmc/articles/PMC6269712/ /pubmed/23478515 http://dx.doi.org/10.3390/molecules18033168 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Review
Neya, Saburo
Dynamic Motion and Rearranged Molecular Shape of Heme in Myoglobin: Structural and Functional Consequences
title Dynamic Motion and Rearranged Molecular Shape of Heme in Myoglobin: Structural and Functional Consequences
title_full Dynamic Motion and Rearranged Molecular Shape of Heme in Myoglobin: Structural and Functional Consequences
title_fullStr Dynamic Motion and Rearranged Molecular Shape of Heme in Myoglobin: Structural and Functional Consequences
title_full_unstemmed Dynamic Motion and Rearranged Molecular Shape of Heme in Myoglobin: Structural and Functional Consequences
title_short Dynamic Motion and Rearranged Molecular Shape of Heme in Myoglobin: Structural and Functional Consequences
title_sort dynamic motion and rearranged molecular shape of heme in myoglobin: structural and functional consequences
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6269712/
https://www.ncbi.nlm.nih.gov/pubmed/23478515
http://dx.doi.org/10.3390/molecules18033168
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