Cargando…

Structural Characterization of Intrinsically Disordered Proteins by NMR Spectroscopy

Recent advances in NMR methodology and techniques allow the structural investigation of biomolecules of increasing size with atomic resolution. NMR spectroscopy is especially well-suited for the study of intrinsically disordered proteins (IDPs) and intrinsically disordered regions (IDRs) which are i...

Descripción completa

Detalles Bibliográficos
Autores principales: Kosol, Simone, Contreras-Martos, Sara, Cedeño, Cesyen, Tompa, Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6269831/
https://www.ncbi.nlm.nih.gov/pubmed/24008243
http://dx.doi.org/10.3390/molecules180910802
_version_ 1783376558308720640
author Kosol, Simone
Contreras-Martos, Sara
Cedeño, Cesyen
Tompa, Peter
author_facet Kosol, Simone
Contreras-Martos, Sara
Cedeño, Cesyen
Tompa, Peter
author_sort Kosol, Simone
collection PubMed
description Recent advances in NMR methodology and techniques allow the structural investigation of biomolecules of increasing size with atomic resolution. NMR spectroscopy is especially well-suited for the study of intrinsically disordered proteins (IDPs) and intrinsically disordered regions (IDRs) which are in general highly flexible and do not have a well-defined secondary or tertiary structure under functional conditions. In the last decade, the important role of IDPs in many essential cellular processes has become more evident as the lack of a stable tertiary structure of many protagonists in signal transduction, transcription regulation and cell-cycle regulation has been discovered. The growing demand for structural data of IDPs required the development and adaption of methods such as (13)C-direct detected experiments, paramagnetic relaxation enhancements (PREs) or residual dipolar couplings (RDCs) for the study of ‘unstructured’ molecules in vitro and in-cell. The information obtained by NMR can be processed with novel computational tools to generate conformational ensembles that visualize the conformations IDPs sample under functional conditions. Here, we address NMR experiments and strategies that enable the generation of detailed structural models of IDPs.
format Online
Article
Text
id pubmed-6269831
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-62698312018-12-18 Structural Characterization of Intrinsically Disordered Proteins by NMR Spectroscopy Kosol, Simone Contreras-Martos, Sara Cedeño, Cesyen Tompa, Peter Molecules Review Recent advances in NMR methodology and techniques allow the structural investigation of biomolecules of increasing size with atomic resolution. NMR spectroscopy is especially well-suited for the study of intrinsically disordered proteins (IDPs) and intrinsically disordered regions (IDRs) which are in general highly flexible and do not have a well-defined secondary or tertiary structure under functional conditions. In the last decade, the important role of IDPs in many essential cellular processes has become more evident as the lack of a stable tertiary structure of many protagonists in signal transduction, transcription regulation and cell-cycle regulation has been discovered. The growing demand for structural data of IDPs required the development and adaption of methods such as (13)C-direct detected experiments, paramagnetic relaxation enhancements (PREs) or residual dipolar couplings (RDCs) for the study of ‘unstructured’ molecules in vitro and in-cell. The information obtained by NMR can be processed with novel computational tools to generate conformational ensembles that visualize the conformations IDPs sample under functional conditions. Here, we address NMR experiments and strategies that enable the generation of detailed structural models of IDPs. MDPI 2013-09-04 /pmc/articles/PMC6269831/ /pubmed/24008243 http://dx.doi.org/10.3390/molecules180910802 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Review
Kosol, Simone
Contreras-Martos, Sara
Cedeño, Cesyen
Tompa, Peter
Structural Characterization of Intrinsically Disordered Proteins by NMR Spectroscopy
title Structural Characterization of Intrinsically Disordered Proteins by NMR Spectroscopy
title_full Structural Characterization of Intrinsically Disordered Proteins by NMR Spectroscopy
title_fullStr Structural Characterization of Intrinsically Disordered Proteins by NMR Spectroscopy
title_full_unstemmed Structural Characterization of Intrinsically Disordered Proteins by NMR Spectroscopy
title_short Structural Characterization of Intrinsically Disordered Proteins by NMR Spectroscopy
title_sort structural characterization of intrinsically disordered proteins by nmr spectroscopy
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6269831/
https://www.ncbi.nlm.nih.gov/pubmed/24008243
http://dx.doi.org/10.3390/molecules180910802
work_keys_str_mv AT kosolsimone structuralcharacterizationofintrinsicallydisorderedproteinsbynmrspectroscopy
AT contrerasmartossara structuralcharacterizationofintrinsicallydisorderedproteinsbynmrspectroscopy
AT cedenocesyen structuralcharacterizationofintrinsicallydisorderedproteinsbynmrspectroscopy
AT tompapeter structuralcharacterizationofintrinsicallydisorderedproteinsbynmrspectroscopy