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Supramolecular Ring Structures of 7-Methylguanine: A Computational Study of Its Self-assembly and Anion Binding

The density functional theory calculations of 7-methylguanine clusters revealed that stable ring assemblies can be formed with or without anions in the center position and hexameric clusters are the most stable and most planar ones. The coordination of anions (Cl(−), Br(−), NO(3)(−)) stabilizes and...

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Autores principales: Paragi, Gábor, Kupihár, Zoltán, Guerra, Célia Fonseca, Bickelhaupt, F. Matthias, Kovács, Lajos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2012
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6269867/
https://www.ncbi.nlm.nih.gov/pubmed/23271462
http://dx.doi.org/10.3390/molecules18010225
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author Paragi, Gábor
Kupihár, Zoltán
Guerra, Célia Fonseca
Bickelhaupt, F. Matthias
Kovács, Lajos
author_facet Paragi, Gábor
Kupihár, Zoltán
Guerra, Célia Fonseca
Bickelhaupt, F. Matthias
Kovács, Lajos
author_sort Paragi, Gábor
collection PubMed
description The density functional theory calculations of 7-methylguanine clusters revealed that stable ring assemblies can be formed with or without anions in the center position and hexameric clusters are the most stable and most planar ones. The coordination of anions (Cl(−), Br(−), NO(3)(−)) stabilizes and thus favors the formation of planar aggregates. We believe that the predicted planar structures stabilized by anions are good models for self-assembly structures formed at solid-liquid or solid-gas interfaces. Comparing the bonding and average H-bond energy to reference ribbon calculations we pointed out the presence of the previously introduced cooperativity effect in circular supramolecular structures of 7-methylguanine.
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spelling pubmed-62698672018-12-14 Supramolecular Ring Structures of 7-Methylguanine: A Computational Study of Its Self-assembly and Anion Binding Paragi, Gábor Kupihár, Zoltán Guerra, Célia Fonseca Bickelhaupt, F. Matthias Kovács, Lajos Molecules Article The density functional theory calculations of 7-methylguanine clusters revealed that stable ring assemblies can be formed with or without anions in the center position and hexameric clusters are the most stable and most planar ones. The coordination of anions (Cl(−), Br(−), NO(3)(−)) stabilizes and thus favors the formation of planar aggregates. We believe that the predicted planar structures stabilized by anions are good models for self-assembly structures formed at solid-liquid or solid-gas interfaces. Comparing the bonding and average H-bond energy to reference ribbon calculations we pointed out the presence of the previously introduced cooperativity effect in circular supramolecular structures of 7-methylguanine. MDPI 2012-12-27 /pmc/articles/PMC6269867/ /pubmed/23271462 http://dx.doi.org/10.3390/molecules18010225 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0/ This article is an open-access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Paragi, Gábor
Kupihár, Zoltán
Guerra, Célia Fonseca
Bickelhaupt, F. Matthias
Kovács, Lajos
Supramolecular Ring Structures of 7-Methylguanine: A Computational Study of Its Self-assembly and Anion Binding
title Supramolecular Ring Structures of 7-Methylguanine: A Computational Study of Its Self-assembly and Anion Binding
title_full Supramolecular Ring Structures of 7-Methylguanine: A Computational Study of Its Self-assembly and Anion Binding
title_fullStr Supramolecular Ring Structures of 7-Methylguanine: A Computational Study of Its Self-assembly and Anion Binding
title_full_unstemmed Supramolecular Ring Structures of 7-Methylguanine: A Computational Study of Its Self-assembly and Anion Binding
title_short Supramolecular Ring Structures of 7-Methylguanine: A Computational Study of Its Self-assembly and Anion Binding
title_sort supramolecular ring structures of 7-methylguanine: a computational study of its self-assembly and anion binding
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6269867/
https://www.ncbi.nlm.nih.gov/pubmed/23271462
http://dx.doi.org/10.3390/molecules18010225
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