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G-Quadruplexes as Sensing Probes

Guanine-rich sequences of DNA are able to create tetrastranded structures known as G-quadruplexes; they are formed by the stacking of planar G-quartets composed of four guanines paired by Hoogsteen hydrogen bonding. G-quadruplexes act as ligands for metal ions and aptamers for various molecules. Int...

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Autores principales: Ruttkay-Nedecky, Branislav, Kudr, Jiri, Nejdl, Lukas, Maskova, Darina, Kizek, Rene, Adam, Vojtech
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6270327/
https://www.ncbi.nlm.nih.gov/pubmed/24288003
http://dx.doi.org/10.3390/molecules181214760
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author Ruttkay-Nedecky, Branislav
Kudr, Jiri
Nejdl, Lukas
Maskova, Darina
Kizek, Rene
Adam, Vojtech
author_facet Ruttkay-Nedecky, Branislav
Kudr, Jiri
Nejdl, Lukas
Maskova, Darina
Kizek, Rene
Adam, Vojtech
author_sort Ruttkay-Nedecky, Branislav
collection PubMed
description Guanine-rich sequences of DNA are able to create tetrastranded structures known as G-quadruplexes; they are formed by the stacking of planar G-quartets composed of four guanines paired by Hoogsteen hydrogen bonding. G-quadruplexes act as ligands for metal ions and aptamers for various molecules. Interestingly, the G-quadruplexes form a complex with anionic porphyrin hemin and exhibit peroxidase-like activity. This review focuses on overview of sensing techniques based on G-quadruplex complexes with anionic porphyrins for detection of various analytes, including metal ions such as K(+), Ca(2+), Ag(+), Hg(2+), Cu(2+), Pb(2+), Sr(2+), organic molecules, nucleic acids, and proteins. Principles of G-quadruplex-based detection methods involve DNA conformational change caused by the presence of analyte which leads to a decrease or an increase in peroxidase activity, fluorescence, or electrochemical signal of the used probe. The advantages of various detection techniques are also discussed.
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spelling pubmed-62703272018-12-20 G-Quadruplexes as Sensing Probes Ruttkay-Nedecky, Branislav Kudr, Jiri Nejdl, Lukas Maskova, Darina Kizek, Rene Adam, Vojtech Molecules Review Guanine-rich sequences of DNA are able to create tetrastranded structures known as G-quadruplexes; they are formed by the stacking of planar G-quartets composed of four guanines paired by Hoogsteen hydrogen bonding. G-quadruplexes act as ligands for metal ions and aptamers for various molecules. Interestingly, the G-quadruplexes form a complex with anionic porphyrin hemin and exhibit peroxidase-like activity. This review focuses on overview of sensing techniques based on G-quadruplex complexes with anionic porphyrins for detection of various analytes, including metal ions such as K(+), Ca(2+), Ag(+), Hg(2+), Cu(2+), Pb(2+), Sr(2+), organic molecules, nucleic acids, and proteins. Principles of G-quadruplex-based detection methods involve DNA conformational change caused by the presence of analyte which leads to a decrease or an increase in peroxidase activity, fluorescence, or electrochemical signal of the used probe. The advantages of various detection techniques are also discussed. MDPI 2013-11-28 /pmc/articles/PMC6270327/ /pubmed/24288003 http://dx.doi.org/10.3390/molecules181214760 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Review
Ruttkay-Nedecky, Branislav
Kudr, Jiri
Nejdl, Lukas
Maskova, Darina
Kizek, Rene
Adam, Vojtech
G-Quadruplexes as Sensing Probes
title G-Quadruplexes as Sensing Probes
title_full G-Quadruplexes as Sensing Probes
title_fullStr G-Quadruplexes as Sensing Probes
title_full_unstemmed G-Quadruplexes as Sensing Probes
title_short G-Quadruplexes as Sensing Probes
title_sort g-quadruplexes as sensing probes
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6270327/
https://www.ncbi.nlm.nih.gov/pubmed/24288003
http://dx.doi.org/10.3390/molecules181214760
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