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G-Quadruplexes as Sensing Probes
Guanine-rich sequences of DNA are able to create tetrastranded structures known as G-quadruplexes; they are formed by the stacking of planar G-quartets composed of four guanines paired by Hoogsteen hydrogen bonding. G-quadruplexes act as ligands for metal ions and aptamers for various molecules. Int...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6270327/ https://www.ncbi.nlm.nih.gov/pubmed/24288003 http://dx.doi.org/10.3390/molecules181214760 |
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author | Ruttkay-Nedecky, Branislav Kudr, Jiri Nejdl, Lukas Maskova, Darina Kizek, Rene Adam, Vojtech |
author_facet | Ruttkay-Nedecky, Branislav Kudr, Jiri Nejdl, Lukas Maskova, Darina Kizek, Rene Adam, Vojtech |
author_sort | Ruttkay-Nedecky, Branislav |
collection | PubMed |
description | Guanine-rich sequences of DNA are able to create tetrastranded structures known as G-quadruplexes; they are formed by the stacking of planar G-quartets composed of four guanines paired by Hoogsteen hydrogen bonding. G-quadruplexes act as ligands for metal ions and aptamers for various molecules. Interestingly, the G-quadruplexes form a complex with anionic porphyrin hemin and exhibit peroxidase-like activity. This review focuses on overview of sensing techniques based on G-quadruplex complexes with anionic porphyrins for detection of various analytes, including metal ions such as K(+), Ca(2+), Ag(+), Hg(2+), Cu(2+), Pb(2+), Sr(2+), organic molecules, nucleic acids, and proteins. Principles of G-quadruplex-based detection methods involve DNA conformational change caused by the presence of analyte which leads to a decrease or an increase in peroxidase activity, fluorescence, or electrochemical signal of the used probe. The advantages of various detection techniques are also discussed. |
format | Online Article Text |
id | pubmed-6270327 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-62703272018-12-20 G-Quadruplexes as Sensing Probes Ruttkay-Nedecky, Branislav Kudr, Jiri Nejdl, Lukas Maskova, Darina Kizek, Rene Adam, Vojtech Molecules Review Guanine-rich sequences of DNA are able to create tetrastranded structures known as G-quadruplexes; they are formed by the stacking of planar G-quartets composed of four guanines paired by Hoogsteen hydrogen bonding. G-quadruplexes act as ligands for metal ions and aptamers for various molecules. Interestingly, the G-quadruplexes form a complex with anionic porphyrin hemin and exhibit peroxidase-like activity. This review focuses on overview of sensing techniques based on G-quadruplex complexes with anionic porphyrins for detection of various analytes, including metal ions such as K(+), Ca(2+), Ag(+), Hg(2+), Cu(2+), Pb(2+), Sr(2+), organic molecules, nucleic acids, and proteins. Principles of G-quadruplex-based detection methods involve DNA conformational change caused by the presence of analyte which leads to a decrease or an increase in peroxidase activity, fluorescence, or electrochemical signal of the used probe. The advantages of various detection techniques are also discussed. MDPI 2013-11-28 /pmc/articles/PMC6270327/ /pubmed/24288003 http://dx.doi.org/10.3390/molecules181214760 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Review Ruttkay-Nedecky, Branislav Kudr, Jiri Nejdl, Lukas Maskova, Darina Kizek, Rene Adam, Vojtech G-Quadruplexes as Sensing Probes |
title | G-Quadruplexes as Sensing Probes |
title_full | G-Quadruplexes as Sensing Probes |
title_fullStr | G-Quadruplexes as Sensing Probes |
title_full_unstemmed | G-Quadruplexes as Sensing Probes |
title_short | G-Quadruplexes as Sensing Probes |
title_sort | g-quadruplexes as sensing probes |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6270327/ https://www.ncbi.nlm.nih.gov/pubmed/24288003 http://dx.doi.org/10.3390/molecules181214760 |
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