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The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory
Chemical bond breaking and formation during chemical reactions can be observed using “transition state spectroscopy”. Comparing the measurement result of the transition state spectroscopy with the simulation result of single direct-dynamics trajectory, we have elucidated the reaction dynamics of Cla...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6270580/ https://www.ncbi.nlm.nih.gov/pubmed/23381025 http://dx.doi.org/10.3390/molecules18021995 |
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author | Iwakura, Izumi Kaneko, Yu Hayashi, Shigehiko Yabushita, Atsushi Kobayashi, Takayoshi |
author_facet | Iwakura, Izumi Kaneko, Yu Hayashi, Shigehiko Yabushita, Atsushi Kobayashi, Takayoshi |
author_sort | Iwakura, Izumi |
collection | PubMed |
description | Chemical bond breaking and formation during chemical reactions can be observed using “transition state spectroscopy”. Comparing the measurement result of the transition state spectroscopy with the simulation result of single direct-dynamics trajectory, we have elucidated the reaction dynamics of Claisen rearrangement of allyl vinyl ether. Observed the reaction of the neat sample liquid, we have estimated the time constants of transformation from straight-chain structure to aromatic-like six-membered ring structure forming the C(1)-C(6) bond. The result clarifies that the reaction proceeds via three steps taking longer time than expected from the gas phase calculation. This finding provides new hypothesis and discussions, helping the development of the field of reaction mechanism analysis. |
format | Online Article Text |
id | pubmed-6270580 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-62705802018-12-14 The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory Iwakura, Izumi Kaneko, Yu Hayashi, Shigehiko Yabushita, Atsushi Kobayashi, Takayoshi Molecules Article Chemical bond breaking and formation during chemical reactions can be observed using “transition state spectroscopy”. Comparing the measurement result of the transition state spectroscopy with the simulation result of single direct-dynamics trajectory, we have elucidated the reaction dynamics of Claisen rearrangement of allyl vinyl ether. Observed the reaction of the neat sample liquid, we have estimated the time constants of transformation from straight-chain structure to aromatic-like six-membered ring structure forming the C(1)-C(6) bond. The result clarifies that the reaction proceeds via three steps taking longer time than expected from the gas phase calculation. This finding provides new hypothesis and discussions, helping the development of the field of reaction mechanism analysis. MDPI 2013-02-04 /pmc/articles/PMC6270580/ /pubmed/23381025 http://dx.doi.org/10.3390/molecules18021995 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/). |
spellingShingle | Article Iwakura, Izumi Kaneko, Yu Hayashi, Shigehiko Yabushita, Atsushi Kobayashi, Takayoshi The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory |
title | The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory |
title_full | The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory |
title_fullStr | The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory |
title_full_unstemmed | The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory |
title_short | The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory |
title_sort | reaction mechanism of claisen rearrangement obtained by transition state spectroscopy and single direct-dynamics trajectory |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6270580/ https://www.ncbi.nlm.nih.gov/pubmed/23381025 http://dx.doi.org/10.3390/molecules18021995 |
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