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The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory

Chemical bond breaking and formation during chemical reactions can be observed using “transition state spectroscopy”. Comparing the measurement result of the transition state spectroscopy with the simulation result of single direct-dynamics trajectory, we have elucidated the reaction dynamics of Cla...

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Autores principales: Iwakura, Izumi, Kaneko, Yu, Hayashi, Shigehiko, Yabushita, Atsushi, Kobayashi, Takayoshi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6270580/
https://www.ncbi.nlm.nih.gov/pubmed/23381025
http://dx.doi.org/10.3390/molecules18021995
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author Iwakura, Izumi
Kaneko, Yu
Hayashi, Shigehiko
Yabushita, Atsushi
Kobayashi, Takayoshi
author_facet Iwakura, Izumi
Kaneko, Yu
Hayashi, Shigehiko
Yabushita, Atsushi
Kobayashi, Takayoshi
author_sort Iwakura, Izumi
collection PubMed
description Chemical bond breaking and formation during chemical reactions can be observed using “transition state spectroscopy”. Comparing the measurement result of the transition state spectroscopy with the simulation result of single direct-dynamics trajectory, we have elucidated the reaction dynamics of Claisen rearrangement of allyl vinyl ether. Observed the reaction of the neat sample liquid, we have estimated the time constants of transformation from straight-chain structure to aromatic-like six-membered ring structure forming the C(1)-C(6) bond. The result clarifies that the reaction proceeds via three steps taking longer time than expected from the gas phase calculation. This finding provides new hypothesis and discussions, helping the development of the field of reaction mechanism analysis.
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spelling pubmed-62705802018-12-14 The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory Iwakura, Izumi Kaneko, Yu Hayashi, Shigehiko Yabushita, Atsushi Kobayashi, Takayoshi Molecules Article Chemical bond breaking and formation during chemical reactions can be observed using “transition state spectroscopy”. Comparing the measurement result of the transition state spectroscopy with the simulation result of single direct-dynamics trajectory, we have elucidated the reaction dynamics of Claisen rearrangement of allyl vinyl ether. Observed the reaction of the neat sample liquid, we have estimated the time constants of transformation from straight-chain structure to aromatic-like six-membered ring structure forming the C(1)-C(6) bond. The result clarifies that the reaction proceeds via three steps taking longer time than expected from the gas phase calculation. This finding provides new hypothesis and discussions, helping the development of the field of reaction mechanism analysis. MDPI 2013-02-04 /pmc/articles/PMC6270580/ /pubmed/23381025 http://dx.doi.org/10.3390/molecules18021995 Text en © 2013 by the authors; licensee MDPI, Basel, Switzerland. http://creativecommons.org/licenses/by/3.0/ This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/3.0/).
spellingShingle Article
Iwakura, Izumi
Kaneko, Yu
Hayashi, Shigehiko
Yabushita, Atsushi
Kobayashi, Takayoshi
The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory
title The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory
title_full The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory
title_fullStr The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory
title_full_unstemmed The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory
title_short The Reaction Mechanism of Claisen Rearrangement Obtained by Transition State Spectroscopy and Single Direct-Dynamics Trajectory
title_sort reaction mechanism of claisen rearrangement obtained by transition state spectroscopy and single direct-dynamics trajectory
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6270580/
https://www.ncbi.nlm.nih.gov/pubmed/23381025
http://dx.doi.org/10.3390/molecules18021995
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