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In Silico Discovery of Potential Uridine-Cytidine Kinase 2 Inhibitors from the Rhizome of Alpinia mutica
Uridine-cytidine kinase 2 is implicated in uncontrolled proliferation of abnormal cells and it is a hallmark of cancer, therefore, there is need for effective inhibitors of this key enzyme. In this study, we employed the used of in silico studies to find effective UCK2 inhibitors of natural origin u...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6274218/ https://www.ncbi.nlm.nih.gov/pubmed/27070566 http://dx.doi.org/10.3390/molecules21040417 |
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author | Malami, Ibrahim Abdul, Ahmad Bustamam Abdullah, Rasedee Bt Kassim, Nur Kartinee Waziri, Peter Christopher Etti, Imaobong |
author_facet | Malami, Ibrahim Abdul, Ahmad Bustamam Abdullah, Rasedee Bt Kassim, Nur Kartinee Waziri, Peter Christopher Etti, Imaobong |
author_sort | Malami, Ibrahim |
collection | PubMed |
description | Uridine-cytidine kinase 2 is implicated in uncontrolled proliferation of abnormal cells and it is a hallmark of cancer, therefore, there is need for effective inhibitors of this key enzyme. In this study, we employed the used of in silico studies to find effective UCK2 inhibitors of natural origin using bioinformatics tools. An in vitro kinase assay was established by measuring the amount of ADP production in the presence of ATP and 5-fluorouridine as a substrate. Molecular docking studies revealed an interesting ligand interaction with the UCK2 protein for both flavokawain B and alpinetin. Both compounds were found to reduce ADP production, possibly by inhibiting UCK2 activity in vitro. In conclusion, we have identified flavokawain B and alpinetin as potential natural UCK2 inhibitors as determined by their interactions with UCK2 protein using in silico molecular docking studies. This can provide information to identify lead candidates for further drug design and development. |
format | Online Article Text |
id | pubmed-6274218 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-62742182018-12-28 In Silico Discovery of Potential Uridine-Cytidine Kinase 2 Inhibitors from the Rhizome of Alpinia mutica Malami, Ibrahim Abdul, Ahmad Bustamam Abdullah, Rasedee Bt Kassim, Nur Kartinee Waziri, Peter Christopher Etti, Imaobong Molecules Article Uridine-cytidine kinase 2 is implicated in uncontrolled proliferation of abnormal cells and it is a hallmark of cancer, therefore, there is need for effective inhibitors of this key enzyme. In this study, we employed the used of in silico studies to find effective UCK2 inhibitors of natural origin using bioinformatics tools. An in vitro kinase assay was established by measuring the amount of ADP production in the presence of ATP and 5-fluorouridine as a substrate. Molecular docking studies revealed an interesting ligand interaction with the UCK2 protein for both flavokawain B and alpinetin. Both compounds were found to reduce ADP production, possibly by inhibiting UCK2 activity in vitro. In conclusion, we have identified flavokawain B and alpinetin as potential natural UCK2 inhibitors as determined by their interactions with UCK2 protein using in silico molecular docking studies. This can provide information to identify lead candidates for further drug design and development. MDPI 2016-04-08 /pmc/articles/PMC6274218/ /pubmed/27070566 http://dx.doi.org/10.3390/molecules21040417 Text en © 2016 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons by Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Malami, Ibrahim Abdul, Ahmad Bustamam Abdullah, Rasedee Bt Kassim, Nur Kartinee Waziri, Peter Christopher Etti, Imaobong In Silico Discovery of Potential Uridine-Cytidine Kinase 2 Inhibitors from the Rhizome of Alpinia mutica |
title | In Silico Discovery of Potential Uridine-Cytidine Kinase 2 Inhibitors from the Rhizome of Alpinia mutica |
title_full | In Silico Discovery of Potential Uridine-Cytidine Kinase 2 Inhibitors from the Rhizome of Alpinia mutica |
title_fullStr | In Silico Discovery of Potential Uridine-Cytidine Kinase 2 Inhibitors from the Rhizome of Alpinia mutica |
title_full_unstemmed | In Silico Discovery of Potential Uridine-Cytidine Kinase 2 Inhibitors from the Rhizome of Alpinia mutica |
title_short | In Silico Discovery of Potential Uridine-Cytidine Kinase 2 Inhibitors from the Rhizome of Alpinia mutica |
title_sort | in silico discovery of potential uridine-cytidine kinase 2 inhibitors from the rhizome of alpinia mutica |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6274218/ https://www.ncbi.nlm.nih.gov/pubmed/27070566 http://dx.doi.org/10.3390/molecules21040417 |
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