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The Melting Diagram of Protein Solutions and Its Thermodynamic Interpretation

Here we present a novel method for the characterization of the hydration of protein solutions based on measuring and evaluating two-component wide-line (1)H NMR signals. We also provide a description of key elements of the procedure conceived for the thermodynamic interpretation of such results. The...

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Autores principales: Tompa, Kálmán, Bokor, Mónika, Tompa, Péter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6274677/
https://www.ncbi.nlm.nih.gov/pubmed/30424574
http://dx.doi.org/10.3390/ijms19113571
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author Tompa, Kálmán
Bokor, Mónika
Tompa, Péter
author_facet Tompa, Kálmán
Bokor, Mónika
Tompa, Péter
author_sort Tompa, Kálmán
collection PubMed
description Here we present a novel method for the characterization of the hydration of protein solutions based on measuring and evaluating two-component wide-line (1)H NMR signals. We also provide a description of key elements of the procedure conceived for the thermodynamic interpretation of such results. These interdependent experimental and theoretical treatments provide direct experimental insight into the potential energy surface of proteins. The utility of our approach is demonstrated through the examples of two proteins of distinct structural classes: the globular, structured ubiquitin; and the intrinsically disordered ERD10 (early response to dehydration 10). We provide a detailed analysis and interpretation of data recorded earlier by cooling and slowly warming the protein solutions through thermal equilibrium states. We introduce and use order parameters that can be thus derived to characterize the distribution of potential energy barriers inhibiting the movement of water molecules bound to the surface of the protein. Our results enable a quantitative description of the ratio of ordered and disordered parts of proteins, and of the energy relations of protein–water bonds in aqueous solutions of the proteins.
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spelling pubmed-62746772018-12-15 The Melting Diagram of Protein Solutions and Its Thermodynamic Interpretation Tompa, Kálmán Bokor, Mónika Tompa, Péter Int J Mol Sci Article Here we present a novel method for the characterization of the hydration of protein solutions based on measuring and evaluating two-component wide-line (1)H NMR signals. We also provide a description of key elements of the procedure conceived for the thermodynamic interpretation of such results. These interdependent experimental and theoretical treatments provide direct experimental insight into the potential energy surface of proteins. The utility of our approach is demonstrated through the examples of two proteins of distinct structural classes: the globular, structured ubiquitin; and the intrinsically disordered ERD10 (early response to dehydration 10). We provide a detailed analysis and interpretation of data recorded earlier by cooling and slowly warming the protein solutions through thermal equilibrium states. We introduce and use order parameters that can be thus derived to characterize the distribution of potential energy barriers inhibiting the movement of water molecules bound to the surface of the protein. Our results enable a quantitative description of the ratio of ordered and disordered parts of proteins, and of the energy relations of protein–water bonds in aqueous solutions of the proteins. MDPI 2018-11-12 /pmc/articles/PMC6274677/ /pubmed/30424574 http://dx.doi.org/10.3390/ijms19113571 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tompa, Kálmán
Bokor, Mónika
Tompa, Péter
The Melting Diagram of Protein Solutions and Its Thermodynamic Interpretation
title The Melting Diagram of Protein Solutions and Its Thermodynamic Interpretation
title_full The Melting Diagram of Protein Solutions and Its Thermodynamic Interpretation
title_fullStr The Melting Diagram of Protein Solutions and Its Thermodynamic Interpretation
title_full_unstemmed The Melting Diagram of Protein Solutions and Its Thermodynamic Interpretation
title_short The Melting Diagram of Protein Solutions and Its Thermodynamic Interpretation
title_sort melting diagram of protein solutions and its thermodynamic interpretation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6274677/
https://www.ncbi.nlm.nih.gov/pubmed/30424574
http://dx.doi.org/10.3390/ijms19113571
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