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The assessment of DNA from marine organisms via a modified salting-out protocol

We developed a rapid, practical and non-toxic salting-out method for the extraction of DNA from marine organisms, and tested it on two representative species of Porifera and Cnidaria, both living in association with symbiotic zooxanthellae. We tested the efficiency of the protocol by comparing the o...

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Autores principales: Ferrara, Giovanni Battista, Murgia, Barbara, Parodi, Anna Maria, Valisano, Laura, Cerrano, Carlo, Palmisano, Giulio, Bavestrello, Giorgio, Sara, Michele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Versita 2006
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6275604/
https://www.ncbi.nlm.nih.gov/pubmed/16847562
http://dx.doi.org/10.2478/s11658-006-0013-7
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author Ferrara, Giovanni Battista
Murgia, Barbara
Parodi, Anna Maria
Valisano, Laura
Cerrano, Carlo
Palmisano, Giulio
Bavestrello, Giorgio
Sara, Michele
author_facet Ferrara, Giovanni Battista
Murgia, Barbara
Parodi, Anna Maria
Valisano, Laura
Cerrano, Carlo
Palmisano, Giulio
Bavestrello, Giorgio
Sara, Michele
author_sort Ferrara, Giovanni Battista
collection PubMed
description We developed a rapid, practical and non-toxic salting-out method for the extraction of DNA from marine organisms, and tested it on two representative species of Porifera and Cnidaria, both living in association with symbiotic zooxanthellae. We tested the efficiency of the protocol by comparing the output of the method for fresh tissue, frozen tissue and tissue stored in ethanol. It proved to be effective for extracting DNA in the case of the methods of preservation considered here, and for obtaining quantities of DNA comparable to those obtained via the traditional approach. The DNA from both species was of good quality. The DNA obtained was amplified by PCR using specific primers for the large ribosomal subunit, allowing the identification of the presence of both the host and symbiont genomes.
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spelling pubmed-62756042018-12-10 The assessment of DNA from marine organisms via a modified salting-out protocol Ferrara, Giovanni Battista Murgia, Barbara Parodi, Anna Maria Valisano, Laura Cerrano, Carlo Palmisano, Giulio Bavestrello, Giorgio Sara, Michele Cell Mol Biol Lett Short Communication We developed a rapid, practical and non-toxic salting-out method for the extraction of DNA from marine organisms, and tested it on two representative species of Porifera and Cnidaria, both living in association with symbiotic zooxanthellae. We tested the efficiency of the protocol by comparing the output of the method for fresh tissue, frozen tissue and tissue stored in ethanol. It proved to be effective for extracting DNA in the case of the methods of preservation considered here, and for obtaining quantities of DNA comparable to those obtained via the traditional approach. The DNA from both species was of good quality. The DNA obtained was amplified by PCR using specific primers for the large ribosomal subunit, allowing the identification of the presence of both the host and symbiont genomes. Versita 2006-06-01 /pmc/articles/PMC6275604/ /pubmed/16847562 http://dx.doi.org/10.2478/s11658-006-0013-7 Text en © University of Wrocław 2006
spellingShingle Short Communication
Ferrara, Giovanni Battista
Murgia, Barbara
Parodi, Anna Maria
Valisano, Laura
Cerrano, Carlo
Palmisano, Giulio
Bavestrello, Giorgio
Sara, Michele
The assessment of DNA from marine organisms via a modified salting-out protocol
title The assessment of DNA from marine organisms via a modified salting-out protocol
title_full The assessment of DNA from marine organisms via a modified salting-out protocol
title_fullStr The assessment of DNA from marine organisms via a modified salting-out protocol
title_full_unstemmed The assessment of DNA from marine organisms via a modified salting-out protocol
title_short The assessment of DNA from marine organisms via a modified salting-out protocol
title_sort assessment of dna from marine organisms via a modified salting-out protocol
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6275604/
https://www.ncbi.nlm.nih.gov/pubmed/16847562
http://dx.doi.org/10.2478/s11658-006-0013-7
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