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The assessment of DNA from marine organisms via a modified salting-out protocol
We developed a rapid, practical and non-toxic salting-out method for the extraction of DNA from marine organisms, and tested it on two representative species of Porifera and Cnidaria, both living in association with symbiotic zooxanthellae. We tested the efficiency of the protocol by comparing the o...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Versita
2006
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6275604/ https://www.ncbi.nlm.nih.gov/pubmed/16847562 http://dx.doi.org/10.2478/s11658-006-0013-7 |
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author | Ferrara, Giovanni Battista Murgia, Barbara Parodi, Anna Maria Valisano, Laura Cerrano, Carlo Palmisano, Giulio Bavestrello, Giorgio Sara, Michele |
author_facet | Ferrara, Giovanni Battista Murgia, Barbara Parodi, Anna Maria Valisano, Laura Cerrano, Carlo Palmisano, Giulio Bavestrello, Giorgio Sara, Michele |
author_sort | Ferrara, Giovanni Battista |
collection | PubMed |
description | We developed a rapid, practical and non-toxic salting-out method for the extraction of DNA from marine organisms, and tested it on two representative species of Porifera and Cnidaria, both living in association with symbiotic zooxanthellae. We tested the efficiency of the protocol by comparing the output of the method for fresh tissue, frozen tissue and tissue stored in ethanol. It proved to be effective for extracting DNA in the case of the methods of preservation considered here, and for obtaining quantities of DNA comparable to those obtained via the traditional approach. The DNA from both species was of good quality. The DNA obtained was amplified by PCR using specific primers for the large ribosomal subunit, allowing the identification of the presence of both the host and symbiont genomes. |
format | Online Article Text |
id | pubmed-6275604 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2006 |
publisher | Versita |
record_format | MEDLINE/PubMed |
spelling | pubmed-62756042018-12-10 The assessment of DNA from marine organisms via a modified salting-out protocol Ferrara, Giovanni Battista Murgia, Barbara Parodi, Anna Maria Valisano, Laura Cerrano, Carlo Palmisano, Giulio Bavestrello, Giorgio Sara, Michele Cell Mol Biol Lett Short Communication We developed a rapid, practical and non-toxic salting-out method for the extraction of DNA from marine organisms, and tested it on two representative species of Porifera and Cnidaria, both living in association with symbiotic zooxanthellae. We tested the efficiency of the protocol by comparing the output of the method for fresh tissue, frozen tissue and tissue stored in ethanol. It proved to be effective for extracting DNA in the case of the methods of preservation considered here, and for obtaining quantities of DNA comparable to those obtained via the traditional approach. The DNA from both species was of good quality. The DNA obtained was amplified by PCR using specific primers for the large ribosomal subunit, allowing the identification of the presence of both the host and symbiont genomes. Versita 2006-06-01 /pmc/articles/PMC6275604/ /pubmed/16847562 http://dx.doi.org/10.2478/s11658-006-0013-7 Text en © University of Wrocław 2006 |
spellingShingle | Short Communication Ferrara, Giovanni Battista Murgia, Barbara Parodi, Anna Maria Valisano, Laura Cerrano, Carlo Palmisano, Giulio Bavestrello, Giorgio Sara, Michele The assessment of DNA from marine organisms via a modified salting-out protocol |
title | The assessment of DNA from marine organisms via a modified salting-out protocol |
title_full | The assessment of DNA from marine organisms via a modified salting-out protocol |
title_fullStr | The assessment of DNA from marine organisms via a modified salting-out protocol |
title_full_unstemmed | The assessment of DNA from marine organisms via a modified salting-out protocol |
title_short | The assessment of DNA from marine organisms via a modified salting-out protocol |
title_sort | assessment of dna from marine organisms via a modified salting-out protocol |
topic | Short Communication |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6275604/ https://www.ncbi.nlm.nih.gov/pubmed/16847562 http://dx.doi.org/10.2478/s11658-006-0013-7 |
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